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归档下一代测序数据。

Archiving next generation sequencing data.

机构信息

National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.

出版信息

Nucleic Acids Res. 2010 Jan;38(Database issue):D870-1. doi: 10.1093/nar/gkp1078. Epub 2009 Dec 3.

Abstract

Next generation sequencing platforms are producing biological sequencing data in unprecedented amounts. The partners of the International Nucleotide Sequencing Database Collaboration, which includes the National Center for Biotechnology Information (NCBI), the European Bioinformatics Institute (EBI), and the DNA Data Bank of Japan (DDBJ), have established the Sequence Read Archive (SRA) to provide the scientific community with an archival destination for next generation data sets. The SRA is now accessible at http://www.ncbi.nlm.nih.gov/Traces/sra from NCBI, at http://www.ebi.ac.uk/ena from EBI and at http://www.ddbj.nig.ac.jp/sub/trace_sra-e.html from DDBJ. Users of these resources can obtain data sets deposited in any of the three SRA instances. Links and submission instructions are provided.

摘要

下一代测序平台正在产生前所未有的生物测序数据。国际核苷酸测序数据库合作组织(包括美国国立生物技术信息中心(NCBI)、欧洲生物信息学研究所(EBI)和日本 DNA 数据库(DDBJ))的合作伙伴已经建立了序列读取档案(SRA),为科学界提供了一个下一代数据集的档案目的地。SRA 现在可以在 NCBI 的 http://www.ncbi.nlm.nih.gov/Traces/sra、EBIhttp://www.ebi.ac.uk/ena 和 DDBJ 的 http://www.ddbj.nig.ac.jp/sub/trace_sra-e.html 上访问。这些资源的用户可以获取在三个 SRA 实例中任何一个实例中存储的数据。提供了链接和提交说明。

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