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实施成功的数据管理框架:英国 10K 管理访问模型。

Implementing a successful data-management framework: the UK10K managed access model.

机构信息

The Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, UK.

Centre for Health, Law and Emerging Technologies (HeLEX), Nuffield Department of Population Health, University of Oxford, Old Road Campus, Oxford OX3 7LF, UK.

出版信息

Genome Med. 2013 Nov 15;5(11):100. doi: 10.1186/gm504. eCollection 2013.

Abstract

This paper outlines the history behind open access principles and describes the development of a managed access data-sharing process for the UK10K Project, currently Britain's largest genomic sequencing consortium (2010 to 2013). Funded by the Wellcome Trust, the purpose of UK10K was two-fold: to investigate how low-frequency and rare genetic variants contribute to human disease, and to provide an enduring data resource for future research into human genetics. In this paper, we discuss the challenge of reconciling data-sharing principles with the practicalities of delivering a sequencing project of UK10K's scope and magnitude. We describe the development of a sustainable, easy-to-use managed access system that allowed rapid access to UK10K data, while protecting the interests of participants and data generators alike. Specifically, we focus in depth on the three key issues that emerge in the data pipeline: study recruitment, data release and data access.

摘要

本文概述了开放获取原则背后的历史,并描述了英国 10K 项目管理访问数据共享流程的发展情况,该项目是英国目前最大的基因组测序联盟(2010 年至 2013 年)。该项目由惠康信托基金会资助,其目的有两个:一是研究低频和罕见遗传变异如何导致人类疾病,二是为未来人类遗传学研究提供持久的数据资源。本文讨论了如何协调数据共享原则与交付英国 10K 项目规模和范围的测序项目的实际情况之间的挑战。我们描述了一个可持续、易于使用的管理访问系统的开发,该系统允许快速访问英国 10K 数据,同时保护参与者和数据生成者的利益。具体来说,我们深入关注数据管道中出现的三个关键问题:研究招募、数据发布和数据访问。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8069/3978569/29301499162e/gm504-1.jpg

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