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家族性肾母细胞瘤中种系DICER1突变的鉴定及杂合性缺失

Identification of germline DICER1 mutations and loss of heterozygosity in familial Wilms tumour.

作者信息

Palculict Timothy Blake, Ruteshouser E Cristy, Fan Yu, Wang Wenyi, Strong Louise, Huff Vicki

机构信息

Department of Genetics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

出版信息

J Med Genet. 2016 Jun;53(6):385-8. doi: 10.1136/jmedgenet-2015-103311. Epub 2015 Nov 13.

Abstract

Wilms tumour (WT), a paediatric renal cancer, is the most common childhood kidney cancer. The aetiology of WT is heterogeneous with multiple genes known to result in WT tumorigenesis. However, these genes are rarely associated with familial Wilms tumour (FWT). To identify mutations predisposing to FWT, we performed whole-genome sequencing using genomic DNA from three affected/obligate carriers in a large WT family, followed by Sanger sequencing of candidate gene mutations in 47 additional WT families to determine their frequency in FWT. As a result, we identified two novel germline DICER1 mutations (G803R and R800Xfs5) co-segregating in two families, thus expanding the number of reported WT families with unique germline DICER1 mutations. The one large family was found to include individuals with multiple DICER1 syndrome phenotypes, including four WT cases. Interestingly, carriers of the DICER1 mutation displayed a greatly increased frequency of WT development compared with the penetrance observed in previously published pedigrees. Also uniquely, in one tumour this DICER1 mutant allele (G803R) was reduced to homozygosity in contrast to the somatic hotspot mutations typically observed in tumours in DICER1 families.

摘要

肾母细胞瘤(WT)是一种儿童肾癌,是最常见的儿童期肾癌。WT的病因具有异质性,已知多个基因可导致WT肿瘤发生。然而,这些基因很少与家族性肾母细胞瘤(FWT)相关。为了鉴定易患FWT的突变,我们使用来自一个大型WT家族中三名受影响/必然携带者的基因组DNA进行了全基因组测序,随后对另外47个WT家族中的候选基因突变进行了桑格测序,以确定它们在FWT中的频率。结果,我们在两个家族中鉴定出两个新的种系DICER1突变(G803R和R800Xfs5)共分离,从而增加了报道的具有独特种系DICER1突变的WT家族数量。发现其中一个大家族中有多名患有多种DICER1综合征表型的个体,包括4例WT病例。有趣的是,与先前发表的家系中观察到的外显率相比,DICER1突变携带者发生WT的频率大大增加。同样独特的是,在一个肿瘤中,与DICER1家族肿瘤中通常观察到的体细胞热点突变相反,这个DICER1突变等位基因(G803R)纯合化。

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