Key Laboratory of Freshwater Animal Breeding, Ministry of Agriculture of P.R.C., Fishery College, Huazhong Agricultural University, Wuhan 430070, China.
Collaborative Innovation Center for Efficient and Health Production of Fisheries in Hunan Province, Changde 415000, China.
Sci Rep. 2016 Dec 9;6:38716. doi: 10.1038/srep38716.
Previous studies have investigated the physiological responses in the liver of Synechogobius hasta exposed to waterborne zinc (Zn). However, at present, very little is known about the underlying molecular mechanisms of these responses. In this study, RNA sequencing (RNA-seq) was performed to analyse the differences in the hepatic transcriptomes between control and Zn-exposed S. hasta. A total of 36,339 unigenes and 1,615 bp of unigene N50 were detected. These genes were further annotated to the Nonredundant protein (NR), Nonredundant nucleotide (Nt), Swiss-Prot, Kyoto Encyclopedia of Genes and Genomes (KEGG), Clusters of Orthologous Groups (COG) and Gene Ontology (GO) databases. After 60 days of Zn exposure, 708 and 237 genes were significantly up- and down-regulated, respectively. Many differentially expressed genes (DEGs) involved in energy metabolic pathways were identified, and their expression profiles suggested increased catabolic processes and reduced biosynthetic processes. These changes indicated that waterborne Zn exposure increased the energy production and requirement, which was related to the activation of the AMPK signalling pathway. Furthermore, using the primary hepatocytes of S. hasta, we identified the role of the AMPK signalling pathway in Zn-influenced energy metabolism.
先前的研究已经调查了暴露于水基锌(Zn)的 Synechogobius hasta 肝脏中的生理反应。然而,目前对于这些反应的潜在分子机制知之甚少。在这项研究中,进行了 RNA 测序(RNA-seq)以分析对照和 Zn 暴露的 S. hasta 肝脏转录组之间的差异。共检测到 36,339 个 unigenes 和 1,615 bp 的 unigene N50。这些基因进一步注释到非冗余蛋白 (NR)、非冗余核苷酸 (Nt)、Swiss-Prot、京都基因与基因组百科全书 (KEGG)、同源簇分类 (COG) 和基因本体论 (GO) 数据库。在暴露于 Zn 60 天后,分别有 708 个和 237 个基因显著上调和下调。鉴定出许多参与能量代谢途径的差异表达基因(DEGs),其表达谱表明分解代谢过程增加,生物合成过程减少。这些变化表明,水基 Zn 暴露增加了能量的产生和需求,这与 AMPK 信号通路的激活有关。此外,使用 S. hasta 的原代肝细胞,我们确定了 AMPK 信号通路在 Zn 影响的能量代谢中的作用。