Castillo Andreína I, Andreína Pacheco M, Escalante Ananias A
Arizona State University, School of Life Sciences, Tempe, AZ, USA.
Department of Biology, Institute for Genomics and Evolutionary Medicine (igem), Temple University, Philadelphia, PA, USA.
Infect Genet Evol. 2017 Jun;50:7-19. doi: 10.1016/j.meegid.2017.01.024. Epub 2017 Feb 2.
Malaria parasites (genus Plasmodium) are a diverse group found in many species of vertebrate hosts. These parasites invade red blood cells in a complex process comprising several proteins, many encoded by multigene families, one of which is merozoite surface protein 7 (msp7). In the case of Plasmodium vivax, the most geographically widespread human-infecting species, differences in the number of paralogs within multigene families have been previously explained, at least in part, as potential adaptations to the human host. To explore this in msp7, we studied its orthologs in closely related nonhuman primate parasites; investigating both paralog evolutionary history and genetic polymorphism. The emerging patterns were then compared with the human parasite Plasmodium falciparum. We found that the evolution of the msp7 family is consistent with a birth-and-death model, where duplications, pseudogenizations, and gene loss events are common. However, all paralogs in P. vivax and P. falciparum had orthologs in their closely related species in non-human primates indicating that the ancestors of those paralogs precede the events leading to their origins as human parasites. Thus, the number of paralogs cannot be explained as an adaptation to human hosts. Although there is no functional information for msp7 in P. vivax, we found evidence for purifying selection in the genetic polymorphism of some of its paralogs as well as their orthologs in closely related non-human primate parasites. We also found evidence indicating that a few of P. vivax's paralogs may have diverged from their orthologs in non-human primates by episodic positive selection. Hence, they may had been under selection when the lineage leading to P. vivax diverged from the Asian non-human primates and switched into Homininae. All these lines of evidence suggest that msp7 is functionally important in P. vivax.
疟原虫(疟原虫属)是在许多脊椎动物宿主物种中发现的多样化群体。这些寄生虫通过一个复杂的过程侵入红细胞,该过程涉及多种蛋白质,其中许多由多基因家族编码,其中之一是裂殖子表面蛋白7(msp7)。在间日疟原虫(Plasmodium vivax)这种在地理上分布最广泛的感染人类的物种中,多基因家族内旁系同源基因数量的差异此前至少部分被解释为对人类宿主的潜在适应。为了在msp7中探究这一点,我们研究了其在密切相关的非人灵长类寄生虫中的直系同源基因;调查旁系同源基因的进化历史和遗传多态性。然后将出现的模式与人类寄生虫恶性疟原虫(Plasmodium falciparum)进行比较。我们发现msp7家族的进化与生死模型一致,其中重复、假基因化和基因丢失事件很常见。然而,间日疟原虫和恶性疟原虫中的所有旁系同源基因在其密切相关的非人灵长类物种中都有直系同源基因,这表明这些旁系同源基因的祖先早于导致它们作为人类寄生虫起源的事件。因此,旁系同源基因的数量不能被解释为对人类宿主的适应。尽管间日疟原虫中msp7没有功能信息,但我们发现了一些证据,表明在其一些旁系同源基因以及密切相关的非人灵长类寄生虫中的直系同源基因的遗传多态性中存在纯化选择。我们还发现证据表明,间日疟原虫的一些旁系同源基因可能通过偶发的正选择与其在非人灵长类中的直系同源基因发生了分化。因此当导致间日疟原虫的谱系从亚洲非人灵长类分化并转变为人类亚科时,它们可能一直处于选择之下。所有这些证据都表明msp7在间日疟原虫中具有重要功能。