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亚洲弓形虫基因型的地理分布:与邻近大陆的联系

Geographical distribution of Toxoplasma gondii genotypes in Asia: A link with neighboring continents.

作者信息

Chaichan P, Mercier A, Galal L, Mahittikorn A, Ariey F, Morand S, Boumédiène F, Udonsom R, Hamidovic A, Murat J B, Sukthana Y, Dardé M L

机构信息

INSERM UMR_S 1094, Neuroépidémiologie Tropicale, Laboratoire de Parasitologie-Mycologie, Faculté de Médecine, Université de Limoges, Limoges 87025, France.

Department of Protozoology, Faculty of Tropical Medicine, Mahidol University, Thailand.

出版信息

Infect Genet Evol. 2017 Sep;53:227-238. doi: 10.1016/j.meegid.2017.06.002. Epub 2017 Jun 3.

Abstract

Defining the pattern of genetic diversity of Toxoplasma gondii is important to understand its worldwide distribution. During the last decades, a large number of studies have been published on Toxoplasma genotypes circulating in Europe, in North and South America. Two continents are still largely unexplored, Africa and, to a less extent, Asia. In this last continent, an increasing number of publications reported genotypes circulating in diverse provinces of China, but very few data are available for other Asian countries. After a systematic database search, 47 papers related to T. gondii genotypes in Asia were analyzed. Genetic characterization of DNA was performed by microsatellite markers, or more usually by a multiplex PCR using 11 PCR-RFLP markers, allowing data comparison to draw a first global picture of the population structure of this parasite throughout Asia. Overall, 390 isolates or DNA extracts were completely typed by PCR-RFLP and/or microsatellite marker methods, revealing 36 different PCR-RFLP or equivalent microsatellite genotypes: 15 genotypes identified by a ToxoDB number and 21 atypical or unique genotypes. The most common genotype found in Asia is the genotype ToxoDB#9 (Chinese 1). The clonal types I, II and II variant, and III were also commonly found in Asia. The geographical distribution of these genotypes across Asia may reflect either a continuum with Europe for the western part of Asia (presence of Type II), or the circulation of strains through animal migration or human activities between Africa and the Southwestern part of Asia (Africa 1 genotype in Turkey or ToxoDB#20 both I Sri-Lanka and in Ethiopia or Egypt). Although there are some indications of a genetic population structure in Southeast Asian countries different from the rest of Asia, more studies in this tropical part of Asia will be necessary for a region which represent as well as Africa one of the missing links of the T. gondii genetic diversity.

摘要

确定刚地弓形虫的遗传多样性模式对于理解其在全球的分布至关重要。在过去几十年中,已经发表了大量关于欧洲、北美和南美流行的弓形虫基因型的研究。仍有两大洲在很大程度上未被探索,即非洲,以及在较小程度上的亚洲。在亚洲这片大陆上,越来越多的出版物报道了在中国不同省份流行的基因型,但关于其他亚洲国家的数据却非常少。经过系统的数据库搜索,分析了47篇与亚洲弓形虫基因型相关的论文。通过微卫星标记对DNA进行遗传特征分析,或者更常见的是使用11个PCR-RFLP标记进行多重PCR,以便进行数据比较,从而勾勒出这种寄生虫在整个亚洲的种群结构的首张全球图谱。总体而言,通过PCR-RFLP和/或微卫星标记方法对390个分离株或DNA提取物进行了完全分型,揭示了36种不同的PCR-RFLP或等效微卫星基因型:15种通过ToxoDB编号鉴定的基因型以及21种非典型或独特基因型。在亚洲发现的最常见基因型是ToxoDB#9(中国1型)。克隆型I、II和II变体以及III型在亚洲也很常见。这些基因型在亚洲的地理分布可能反映了亚洲西部与欧洲的连续性(存在II型),或者是菌株通过动物迁移或人类活动在非洲和亚洲西南部之间传播(土耳其的非洲1基因型或斯里兰卡和埃塞俄比亚或埃及的ToxoDB#20)。尽管有迹象表明东南亚国家的遗传种群结构与亚洲其他地区不同,但对于亚洲这个热带地区而言,仍需要进行更多研究,因为它与非洲一样,是刚地弓形虫遗传多样性缺失的环节之一。

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