Department of Complex Trait Genetics, Vrije Universiteit Amsterdam, Center for Neurogenomics and Cognitive Research, Amsterdam, The Netherlands.
Institute for Behavior and Biology, Erasmus University Rotterdam, Rotterdam, The Netherlands.
Mol Psychiatry. 2017 Dec;22(12):1680-1690. doi: 10.1038/mp.2017.210. Epub 2017 Oct 31.
The epigenome is associated with biological factors, such as disease status, and environmental factors, such as smoking, alcohol consumption and body mass index. Although there is a widespread perception that environmental influences on the epigenome are pervasive and profound, there has been little evidence to date in humans with respect to environmental factors that are biologically distal. Here we provide evidence on the associations between epigenetic modifications-in our case, CpG methylation-and educational attainment (EA), a biologically distal environmental factor that is arguably among the most important life-shaping experiences for individuals. Specifically, we report the results of an epigenome-wide association study meta-analysis of EA based on data from 27 cohort studies with a total of 10 767 individuals. We find nine CpG probes significantly associated with EA. However, robustness analyses show that all nine probes have previously been found to be associated with smoking. Only two associations remain when we perform a sensitivity analysis in the subset of never-smokers, and these two probes are known to be strongly associated with maternal smoking during pregnancy, and thus their association with EA could be due to correlation between EA and maternal smoking. Moreover, the effect sizes of the associations with EA are far smaller than the known associations with the biologically proximal environmental factors alcohol consumption, body mass index, smoking and maternal smoking during pregnancy. Follow-up analyses that combine the effects of many probes also point to small methylation associations with EA that are highly correlated with the combined effects of smoking. If our findings regarding EA can be generalized to other biologically distal environmental factors, then they cast doubt on the hypothesis that such factors have large effects on the epigenome.
表观基因组与生物因素(如疾病状态)和环境因素(如吸烟、饮酒和体重指数)有关。尽管人们普遍认为环境对表观基因组的影响是普遍存在且深远的,但迄今为止,在人类中,关于生物学上较远的环境因素的证据很少。在这里,我们提供了关于表观遗传修饰(在我们的案例中是 CpG 甲基化)与教育程度(EA)之间关联的证据,教育程度是一种生物学上较远的环境因素,可以说是个体最重要的塑造生活经历之一。具体来说,我们报告了基于 27 项队列研究数据的 EA 全基因组关联研究荟萃分析结果,这些研究共有 10767 人。我们发现 9 个 CpG 探针与 EA 显著相关。然而,稳健性分析表明,这 9 个探针以前都与吸烟有关。当我们在从不吸烟的亚组中进行敏感性分析时,只有两个关联仍然存在,这两个探针与怀孕期间母亲吸烟强烈相关,因此它们与 EA 的关联可能是由于 EA 与母亲吸烟之间的相关性。此外,与 EA 相关的关联的效应大小远小于与生物学上较近的环境因素(如饮酒、体重指数、吸烟和怀孕期间母亲吸烟)的已知关联。结合许多探针效应的后续分析也指向与 EA 相关的小甲基化关联,这些关联与吸烟的综合效应高度相关。如果我们关于 EA 的发现可以推广到其他生物学上较远的环境因素,那么它们就对这样的因素对表观基因组有很大影响的假设提出了质疑。