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细胞周期蛋白 F mRNA 表达在皮肤黑色素瘤患者生存中的潜在作用:细胞周期蛋白 F 上调导致的途径改变的综合分析。

Potential role of cyclin F mRNA expression in the survival of skin melanoma patients: Comprehensive analysis of the pathways altered due to cyclin F upregulation.

机构信息

Department of Histology and Embryology, Faculty of Medicine, Nicolaus Copernicus University in Toruń, Collegium Medicum in Bydgoszcz, 85-092 Bydgoszcz, Poland.

Department of Clinical Pathomorphology, Faculty of Medicine, Nicolaus Copernicus University in Toruń, Collegium Medicum in Bydgoszcz, 85-092 Bydgoszcz, Poland.

出版信息

Oncol Rep. 2018 Jul;40(1):123-144. doi: 10.3892/or.2018.6435. Epub 2018 May 16.

Abstract

Cyclin F is a part of the Skp, Cullin, F-box containing ligase complex. The activity of cyclin F includes cell cycle control, centrosome duplication and response to DNA damage. The cyclin F expression pattern is very similar to cyclin A, but cyclin F is an orphan cyclin without its cyclin-dependent kinase partner. There is little evidence concerning the role of cyclin F in cancer. In the present study, for the first time, we present analysis from The Cancer Genome Atlas (TCGA) data in the context of expression of cyclin F mRNA in melanoma patients. Our original in silico analysis, not published elsewhere before, revealed that high expression of cyclin F in melanoma patients is associated with worse overall survival. Cyclin F and ribonucleotide reductase family member 2 (RRM2) compose a functional axis responsible for nucleotide metabolism. Impairment in this pathway may contribute to increased DNA damage repair and drug resistance. Additionally, we analyzed the expression of RRM2 mRNA and discovered that high expression of RRM2 is associated with worse overall survival. To shed more light on cyclin F overexpression in melanoma, we analyzed all protein data available in the TCGA melanoma dataset. It was found that in patients with upregulated cyclin F mRNA, we noted increased activity of pathways related to cell cycle and DNA damage repair. These data will support further in vitro and in vivo studies on the involvement of cyclin F in skin cutaneous melanoma.

摘要

细胞周期蛋白 F 是 Skp、Cullin、F-box 含有连接酶复合物的一部分。细胞周期蛋白 F 的活性包括细胞周期调控、中心体复制和对 DNA 损伤的反应。细胞周期蛋白 F 的表达模式与细胞周期蛋白 A 非常相似,但细胞周期蛋白 F 是一种没有其细胞周期蛋白依赖性激酶伴侣的孤儿细胞周期蛋白。关于细胞周期蛋白 F 在癌症中的作用的证据很少。在本研究中,我们首次根据黑色素瘤患者中细胞周期蛋白 F mRNA 的表达,从癌症基因组图谱 (TCGA) 数据中进行分析。我们之前未在其他地方发表的原始计算机分析表明,黑色素瘤患者中细胞周期蛋白 F 的高表达与总生存率较差相关。细胞周期蛋白 F 和核糖核苷酸还原酶家族成员 2 (RRM2) 构成负责核苷酸代谢的功能轴。该途径的损伤可能导致 DNA 损伤修复和耐药性增加。此外,我们分析了 RRM2 mRNA 的表达,发现 RRM2 的高表达与总生存率较差相关。为了更深入地了解黑色素瘤中细胞周期蛋白 F 的过表达,我们分析了 TCGA 黑色素瘤数据集所有可用的蛋白质数据。结果发现,在细胞周期蛋白 F mRNA 上调的患者中,我们注意到与细胞周期和 DNA 损伤修复相关的途径活性增加。这些数据将支持进一步在皮肤黑色素瘤中进行细胞周期蛋白 F 参与的体外和体内研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dd5d/6059736/8ecabc4f4805/OR-40-01-0123-g00.jpg

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