Dept Microbial Drugs, Helmholtz Centre for Infection Research, Inhoffenstr. 7, 38124 Braunschweig, Germany.
Nat Prod Rep. 2018 Sep 19;35(9):992-1014. doi: 10.1039/c8np00010g.
Covering: up to December 2017 The diversity of secondary metabolites in the fungal order Xylariales is reviewed with special emphasis on correlations between chemical diversity and biodiversity as inferred from recent taxonomic and phylogenetic studies. The Xylariales are arguably among the predominant fungal endophytes, which are the producer organisms of pharmaceutical lead compounds including the antimycotic sordarins and the antiparasitic nodulisporic acids, as well as the marketed drug, emodepside. Many Xylariales are "macromycetes", which form conspicuous fruiting bodies (stromata), and the metabolite profiles that are predominant in the stromata are often complementary to those encountered in corresponding mycelial cultures of a given species. Secondary metabolite profiles have recently been proven highly informative as additional parameters to support classical morphology and molecular phylogenetic approaches in order to reconstruct evolutionary relationships among these fungi. Even the recent taxonomic rearrangement of the Xylariales has been relying on such approaches, since certain groups of metabolites seem to have significance at the species, genus or family level, respectively, while others are only produced in certain taxa and their production is highly dependent on the culture conditions. The vast metabolic diversity that may be encountered in a single species or strain is illustrated based on examples like Daldinia eschscholtzii, Hypoxylon rickii, and Pestalotiopsis fici. In the future, it appears feasible to increase our knowledge of secondary metabolite diversity by embarking on certain genera that have so far been neglected, as well as by studying the volatile secondary metabolites more intensively. Methods of bioinformatics, phylogenomics and transcriptomics, which have been developed to study other fungi, are readily available for use in such scenarios.
截至 2017 年 12 月,本文综述了木层孔菌目中次生代谢产物的多样性,特别强调了化学多样性与生物多样性之间的相关性,这些相关性是根据最近的分类学和系统发育研究推断出来的。木层孔菌目可以说是主要的真菌内生菌之一,是包括抗真菌索拉定和抗寄生虫诺地丝酸在内的药物先导化合物的产生菌,也是市售药物依美斯汀的产生菌。许多木层孔菌目真菌是“大型真菌”,形成明显的子实体(菌核),在菌核中占优势的代谢产物谱往往与相应物种的菌丝体培养物中遇到的代谢产物谱互补。次生代谢产物谱最近被证明是一种非常有用的附加参数,可以支持经典形态学和分子系统发育方法,以重建这些真菌之间的进化关系。即使是木层孔菌目的最近分类调整,也依赖于这些方法,因为某些组的代谢产物似乎在物种、属或科水平上具有重要意义,而其他代谢产物仅在某些分类群中产生,其产生高度依赖于培养条件。基于 Daldinia eschscholtzii、Hypoxylon rickii 和 Pestalotiopsis fici 等例子,说明了在单个物种或菌株中可能遇到的巨大代谢多样性。在未来,通过研究某些迄今为止被忽视的属,以及更深入地研究挥发性次生代谢物,似乎有可能增加我们对次生代谢多样性的认识。为研究其他真菌而开发的生物信息学、系统基因组学和转录组学方法,在这种情况下很容易被使用。