MTA-DE Laboratory of Protein Dynamics, Department of Biochemistry and Molecular Biology, University of Debrecen, Hungary.
Curr Opin Struct Biol. 2019 Feb;54:19-25. doi: 10.1016/j.sbi.2018.09.008. Epub 2018 Oct 16.
Protein interactions are usually determined by well-defined contact patterns. In this scenario, structuring of the interface is a prerequisite, which takes place prior or coupled to binding. Recent data, however, indicate plasticity of the templated folding pathway as well as considerable variations: polymorphism or dynamics in the bound-state. Conformational fluctuations in both cases are modulated by non-native, transient contacts, which complement suboptimal binding motifs to improve affinity. Here I discuss both templated folding and fuzzy binding mechanisms and propose a uniform scheme.
蛋白质相互作用通常由明确的接触模式决定。在这种情况下,界面的结构是先决条件,它发生在结合之前或与之结合。然而,最近的数据表明,模板折叠途径具有可塑性和相当大的变化:结合态的多态性或动态。在这两种情况下,构象波动都受到非天然的、瞬时接触的调节,这些接触补充了非最佳的结合基序,以提高亲和力。在这里,我讨论了模板折叠和模糊结合机制,并提出了一个统一的方案。