Shenzhen Key Laboratory of Synthetic Genomics and Center for Synthetic Genomics, Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen, 518055, China.
Hubei Collaborative Innovation Center for Green Transformation of Bio-resources, Environmental Microbial Technology Center of Hubei Province, Hubei Key Laboratory of Industrial Biotechnology, College of Life Sciences, Hubei University, Wuhan, 430062, China.
Sci China Life Sci. 2018 Dec;61(12):1515-1527. doi: 10.1007/s11427-018-9403-y. Epub 2018 Nov 20.
Whole genome engineering is now feasible with the aid of genome editing and synthesis tools. Synthesizing a genome from scratch allows modifications of the genomic structure and function to an extent that was hitherto not possible, which will finally lead to new insights into the basic principles of life and enable valuable applications. With several recent genome synthesis projects as examples, the technical details to synthesize a genome and applications of synthetic genome are addressed in this perspective. A series of ongoing or future synthetic genomics projects, including the different genomes to be synthesized in GP-write, synthetic minimal genome, massively recoded genome, chimeric genome and synthetic genome with expanded genetic alphabet, are also discussed here with a special focus on theoretical and technical impediments in the design and synthesis process. Synthetic genomics will become a commonplace to engineer pathways and genomes according to arbitrary sets of design principles with the development of high-efficient, low-cost genome synthesis and assembly technologies.
借助基因组编辑和合成工具,全基因组工程现在成为可能。从头合成基因组可以在以前不可能的程度上修改基因组结构和功能,这最终将导致对生命基本原理的新见解,并实现有价值的应用。本文以最近的几个基因组合成项目为例,介绍了合成基因组的技术细节和应用。本文还讨论了一系列正在进行或未来的合成基因组学项目,包括在 GP-write 中要合成的不同基因组、合成最小基因组、大规模重编码基因组、嵌合基因组和扩展遗传字母表的合成基因组,特别关注设计和合成过程中的理论和技术障碍。随着高效、低成本的基因组合成和组装技术的发展,根据任意设计原则工程途径和基因组将成为一种常见做法。