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CRISPR/Cas 介导的碱基编辑:技术考虑因素和实际应用。

CRISPR/Cas-Mediated Base Editing: Technical Considerations and Practical Applications.

机构信息

Department of Plant Pathology and Environmental Microbiology, and Huck Institute of the Life Sciences, Pennsylvania State University, University Park, PA 16802, USA; ICAR-National Rice Research Institute, Cuttack 753006, India.

Department of Plant Pathology and Environmental Microbiology, and Huck Institute of the Life Sciences, Pennsylvania State University, University Park, PA 16802, USA.

出版信息

Trends Biotechnol. 2019 Oct;37(10):1121-1142. doi: 10.1016/j.tibtech.2019.03.008. Epub 2019 Apr 14.

Abstract

Genome editing with CRISPR/Cas has rapidly gained popularity. Base editing, a new CRISPR/Cas-based approach, can precisely convert one nucleotide to another in DNA or RNA without inducing a double-strand DNA break (DSB). A combination of catalytically impaired nuclease variants with different deaminases has yielded diverse base-editing platforms that aim to address the key limitations such as specificity, protospacer adjacent motif (PAM) compatibility, editing window length, bystander editing, and sequence context preference. Because new base editors significantly reduce unintended editing in the genome, they hold great promise for treating genetic diseases and for developing superior agricultural crops. We review here the development of various base editors, assess their technical advantages and limitations, and discuss their broad applications in basic research, medicine, and agriculture.

摘要

利用 CRISPR/Cas 进行基因组编辑技术迅速普及。碱基编辑是一种新的基于 CRISPR/Cas 的方法,它可以在不诱导双链 DNA 断裂 (DSB) 的情况下精确地将一个核苷酸转换为另一个核苷酸。将具有不同脱氨酶的催化失活核酸酶变体组合在一起,产生了多种碱基编辑平台,旨在解决特异性、邻近基序 (PAM) 兼容性、编辑窗口长度、旁观者编辑和序列上下文偏好等关键限制。由于新的碱基编辑器显著减少了基因组中的非预期编辑,因此它们在治疗遗传疾病和开发优良农业作物方面具有巨大的应用前景。我们在这里回顾了各种碱基编辑器的发展,评估了它们的技术优势和局限性,并讨论了它们在基础研究、医学和农业中的广泛应用。

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