The Ohio State University Biochemistry Program, The Ohio State University, Columbus, OH 43210.
Center for RNA Biology, The Ohio State University, Columbus, OH 43210.
Proc Natl Acad Sci U S A. 2019 May 14;116(20):10058-10063. doi: 10.1073/pnas.1901634116. Epub 2019 Apr 29.
Accurate translation of the genetic code is maintained in part by aminoacyl-tRNA synthetases (aaRS) proofreading mechanisms that ensure correct attachment of a cognate amino acid to a transfer RNA (tRNA). During environmental stress, such as oxidative stress, demands on aaRS proofreading are altered by changes in the availability of cytoplasmic amino acids. For example, oxidative stress increases levels of cytotoxic tyrosine isomers, noncognate amino acids normally excluded from translation by the proofreading activity of phenylalanyl-tRNA synthetase (PheRS). Here we show that oxidation of PheRS induces a conformational change, generating a partially unstructured protein. This conformational change does not affect Phe or Tyr activation or the aminoacylation activity of PheRS. However, in vitro and ex vivo analyses reveal that proofreading activity to hydrolyze Tyr-tRNA is increased during oxidative stress, while the cognate Phe-tRNA aminoacylation activity is unchanged. In HPX, that lack reactive oxygen-scavenging enzymes and accumulate intracellular HO, we found that PheRS proofreading is increased by 11%, thereby providing potential protection against hazardous cytoplasmic -Tyr accumulation. These findings show that in response to oxidative stress, PheRS proofreading is positively regulated without negative effects on the enzyme's housekeeping activity in translation. Our findings also illustrate that while the loss of quality control and mistranslation may be beneficial under some conditions, increased proofreading provides a mechanism for the cell to appropriately respond to environmental changes during oxidative stress.
遗传密码的准确翻译部分依赖于氨酰-tRNA 合成酶(aaRS)的校对机制,该机制确保将正确的氨基酸与转移 RNA(tRNA)结合。在环境压力下,如氧化应激,细胞质氨基酸的可用性变化会改变 aaRS 的校对要求。例如,氧化应激会增加细胞毒性酪氨酸异构体的水平,这些非对应氨基酸通常会被苯丙氨酰-tRNA 合成酶(PheRS)的校对活性排除在翻译之外。在这里,我们表明 PheRS 的氧化会诱导构象变化,从而产生部分无结构的蛋白质。这种构象变化不会影响 Phe 或 Tyr 的激活或 PheRS 的氨酰化活性。然而,体内和体外分析表明,在氧化应激期间,水解 Tyr-tRNA 的校对活性增加,而对应 Phe-tRNA 的氨酰化活性保持不变。在缺乏活性氧清除酶且细胞内 HO 积累的 HPX 中,我们发现 PheRS 的校对活性增加了 11%,从而为防止有害的细胞质 -Tyr 积累提供了潜在的保护。这些发现表明,在氧化应激下,PheRS 的校对受到积极调节,而不会对酶在翻译中的看家活性产生负面影响。我们的研究结果还表明,尽管在某些条件下失去质量控制和错误翻译可能是有益的,但增加的校对提供了一种机制,使细胞能够在氧化应激期间适当地应对环境变化。