State Key Laboratory Breeding Base of Basic Science of Stomatology (Hubei-MOST) and Key Laboratory for Oral Biomedicine of Ministry of Education (KLOBM), School and Hospital of Stomatology, Wuhan University, Wuhan, China.
Department of Anesthesiology, University of Rochester, Rochester, NY, USA.
J Bone Miner Res. 2019 Aug;34(8):1502-1516. doi: 10.1002/jbmr.3716. Epub 2019 May 21.
Transcription factors bind to cell-specific cis-regulatory elements, such as enhancers and promoters, to initiate much of the gene expression program of different biological process. Odontoblast differentiation is a necessary step for tooth formation and is also governed by a complex gene regulatory network. Our previous in vitro experiments showed that Krüppel-like factor 4 (KLF4) can promote odontoblastic differentiation of both mouse dental papillary cells (mDPCs) and human dental pulp cells; however, its mechanism remains unclear. We first used Wnt1-Cre; KLF4 (Klf4 cKO) mice to examine the role of KLF4 during odontoblast differentiation in vivo and demonstrated significantly impaired dentin mineralization and enlarged pulp/root canals. Additionally, combinatory analysis using RNA-seq and ATAC-seq revealed genomewide direct regulatory targets of KLF4 in mouse odontoblasts. We found that KLF4 can directly activate the TGF-β signaling pathway at the beginning of odontoblast differentiation with Runx2 as a cofactor. Furthermore, we found that KLF4 can directly upregulate the expression levels of Dmp1 and Sp7, which are markers of odontoblastic differentiation, through binding to their promoters. Interestingly, as a transcription factor, KLF4 can also recruit histone acetylase as a regulatory companion to the downstream target genes to positively or negatively regulate transcription. To further investigate other regulatory companions of KLF4, we chose histone acetylase HDAC3 and P300. Immunoprecipitation demonstrated that KLF4 interacted with P300 and HDAC3. Next, ChIP analysis detected P300 and HDAC3 enrichment on the promoter region of KLF4 target genes Dmp1 and Sp7. HDAC3 mainly interacted with KLF4 on day 0 of odontoblastic induction, whereas P300 interacted on day 7 of induction. These temporal-specific interactions regulated Dmp1 and Sp7 transcription, thus regulating dentinogenesis. Taken together, these results demonstrated that KLF4 regulates Dmp1 and Sp7 transcription via the modulation of histone acetylation and is vital to dentinogenesis. © 2019 American Society for Bone and Mineral Research.
转录因子与细胞特异性顺式调控元件(如增强子和启动子)结合,启动不同生物学过程的大部分基因表达程序。成牙本质细胞分化是牙齿形成的必要步骤,也受到复杂的基因调控网络的控制。我们之前的体外实验表明, Krüppel 样因子 4(KLF4)可以促进小鼠牙乳头细胞(mDPCs)和成人间充质细胞的成牙本质细胞分化;然而,其机制尚不清楚。我们首先使用 Wnt1-Cre;KLF4(Klf4 cKO)小鼠在体内研究 KLF4 在成牙本质细胞分化过程中的作用,结果表明牙本质矿化明显受损,牙髓/根管增大。此外,使用 RNA-seq 和 ATAC-seq 的组合分析揭示了 KLF4 在小鼠成牙本质细胞中的全基因组直接调控靶标。我们发现,KLF4 可以在成牙本质细胞分化的早期与 Runx2 作为辅助因子直接激活 TGF-β 信号通路。此外,我们发现 KLF4 可以通过结合其启动子直接上调牙本质分化标志物 Dmp1 和 Sp7 的表达水平。有趣的是,作为一种转录因子,KLF4 还可以招募组蛋白乙酰转移酶作为下游靶基因的调节伴侣,以正向或负向调节转录。为了进一步研究 KLF4 的其他调节伴侣,我们选择了组蛋白乙酰转移酶 HDAC3 和 P300。免疫沉淀实验表明 KLF4 与 P300 和 HDAC3 相互作用。接下来,ChIP 分析检测到 KLF4 靶基因 Dmp1 和 Sp7 启动子区域 P300 和 HDAC3 的富集。HDAC3 主要与诱导成牙本质的第 0 天的 KLF4 相互作用,而 P300 则在诱导的第 7 天相互作用。这些时间特异性相互作用调节了 Dmp1 和 Sp7 的转录,从而调节了牙本质生成。总之,这些结果表明 KLF4 通过调节组蛋白乙酰化来调节 Dmp1 和 Sp7 的转录,对牙本质生成至关重要。