Suppr超能文献

角蛋白 1/10(C401A)2B 异二聚体的晶体结构表明其倾向于形成 2B 螺旋的 C 末端的更高阶分子接触。

Crystal Structure of Keratin 1/10(C401A) 2B Heterodimer Demonstrates a Proclivity for the C-Terminus of Helix 2B to Form Higher Order Molecular Contacts.

机构信息

Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT.

Department of Dermatology, Yale University, New Haven, CT.

出版信息

Yale J Biol Med. 2020 Mar 27;93(1):3-17. eCollection 2020 Mar.

Abstract

We previously determined the crystal structure of the wild-type keratin 1/10 helix 2B heterodimer at 3.3 Å resolution. We proposed that the resolution of the diffraction data was limited due to the crystal packing effect from keratin 10 (K10) residue Cys401. Cys401 formed a disulfide-linkage with Cys401 from another K1/10 heterodimer, creating an "X-shaped" structure and a loose crystal packing arrangement. We hypothesized that mutation of Cys401 to alanine would eliminate the disulfide-linkage and improve crystal packing thereby increasing resolution of diffraction and enabling a more accurate side chain electron density map. Indeed, when a K10 Cys401Ala 2B mutant was paired with its native keratin 1 (K1) 2B heterodimer partner its x-ray crystal structure was determined at 2.07 Å resolution; the structure does not contain a disulfide linkage. Superposition of the K1/K10(Cys401Ala) 2B structure onto the wild-type K1/10 2B heterodimer structure had a root-mean-square-deviation of 1.88 Å; the variability in the atomic positions reflects the dynamic motion expected in this filamentous coiled-coil complex. The electrostatic, hydrophobic, and contour features of the molecular surface are similar to the lower resolution wild-type structure. We postulated that elimination of the disulfide linkage in the K1/K10(Cys401Ala) 2B structure could allow for the 2B heterodimers to bind/pack in the A tetramer configuration associated with mature keratin intermediate filament assembly. Analysis of the crystal packing revealed a half-staggered anti-parallel tetrameric complex of 2B heterodimers; however, their register is not consistent with models of the A mode of tetrameric alignment or prior biochemical cross-linking studies.

摘要

我们之前已经确定了野生型角蛋白 1/10 螺旋 2B 异二聚体在 3.3Å分辨率下的晶体结构。我们提出,由于角蛋白 10(K10)残基半胱氨酸 401 的晶体包装效应,衍射数据的分辨率受到限制。Cys401 与另一个 K1/10 异二聚体的 Cys401 形成二硫键,形成“X 形”结构和松散的晶体包装排列。我们假设突变 Cys401 为丙氨酸将消除二硫键并改善晶体包装,从而提高衍射分辨率并使更准确的侧链电子密度图成为可能。事实上,当 K10 Cys401Ala 2B 突变体与天然角蛋白 1(K1)2B 异二聚体伴侣配对时,其 x 射线晶体结构在 2.07Å分辨率下确定;该结构不含二硫键。将 K1/K10(Cys401Ala)2B 结构叠加到野生型 K1/10 2B 异二聚体结构上,均方根偏差为 1.88Å;原子位置的可变性反映了该丝状卷曲螺旋复合物中预期的动态运动。分子表面的静电、疏水性和轮廓特征与较低分辨率的野生型结构相似。我们推测,在 K1/K10(Cys401Ala)2B 结构中消除二硫键可以使 2B 异二聚体以与成熟角蛋白中间丝组装相关的 A 四聚体构型结合/包装。晶体包装分析揭示了半交错反平行四聚体 2B 异二聚体复合物;然而,它们的登记与四聚体排列的 A 模式或先前的生化交联研究的模型不一致。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/356b/7087056/a0202b55c407/yjbm_93_1_3_g01.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验