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基因组范围的和共转录的 R 环抑制剂。

A genome-wide and cotranscriptional suppressor of R loops.

机构信息

Massachusetts General Hospital Cancer Center, Harvard Medical School, Charlestown, Massachusetts 02129, USA.

Department of Pathology, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts 02114, USA.

出版信息

Genes Dev. 2020 Jul 1;34(13-14):863-864. doi: 10.1101/gad.339861.120.

Abstract

R loops arise from hybridization of RNA transcripts with template DNA during transcription. Unrepaired R loops lead to transcription-replication collisions, causing DNA damage and genomic instability. In this issue of , Pérez-Calero and colleagues (pp. 898-912) identify UAP56 as a cotranscriptional RNA-DNA helicase that unwinds R loops. They found that UAP56 helicase activity is required to remove R loops formed from different sources and prevent R-loop accumulation genome-wide at actively transcribed genes.

摘要

R 环是在转录过程中 RNA 转录本与模板 DNA 杂交形成的。未修复的 R 环会导致转录-复制碰撞,从而导致 DNA 损伤和基因组不稳定性。在本期的 中,Pérez-Calero 及其同事(第 898-912 页)鉴定出 UAP56 是一种共转录 RNA-DNA 解旋酶,可解开 R 环。他们发现 UAP56 解旋酶活性对于去除来自不同来源的 R 环以及防止活跃转录基因的全基因组中 R 环积累是必需的。

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本文引用的文献

1
UAP56/DDX39B is a major cotranscriptional RNA-DNA helicase that unwinds harmful R loops genome-wide.
Genes Dev. 2020 Jul 1;34(13-14):898-912. doi: 10.1101/gad.336024.119. Epub 2020 May 21.
2
3
ATR Protects the Genome against R Loops through a MUS81-Triggered Feedback Loop.
Mol Cell. 2020 Feb 6;77(3):514-527.e4. doi: 10.1016/j.molcel.2019.10.010. Epub 2019 Nov 7.
4
R-Loops as Cellular Regulators and Genomic Threats.
Mol Cell. 2019 Feb 7;73(3):398-411. doi: 10.1016/j.molcel.2019.01.024.
5
Human THO-Sin3A interaction reveals new mechanisms to prevent R-loops that cause genome instability.
EMBO J. 2017 Dec 1;36(23):3532-3547. doi: 10.15252/embj.201797208. Epub 2017 Oct 26.
6
Functions of Replication Protein A as a Sensor of R Loops and a Regulator of RNaseH1.
Mol Cell. 2017 Mar 2;65(5):832-847.e4. doi: 10.1016/j.molcel.2017.01.029.
7
R loops: new modulators of genome dynamics and function.
Nat Rev Genet. 2015 Oct;16(10):583-97. doi: 10.1038/nrg3961. Epub 2015 Sep 15.
8
BRCA1 recruitment to transcriptional pause sites is required for R-loop-driven DNA damage repair.
Mol Cell. 2015 Feb 19;57(4):636-647. doi: 10.1016/j.molcel.2015.01.011.
9
Transcription-coupled nucleotide excision repair factors promote R-loop-induced genome instability.
Mol Cell. 2014 Dec 18;56(6):777-85. doi: 10.1016/j.molcel.2014.10.020. Epub 2014 Nov 26.
10
Genome instability and transcription elongation impairment in human cells depleted of THO/TREX.
PLoS Genet. 2011 Dec;7(12):e1002386. doi: 10.1371/journal.pgen.1002386. Epub 2011 Dec 1.

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