Biochemistry Program, Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt.
Biotechnology/Biomolecular Chemistry Program, Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt.
Biomolecules. 2020 Jul 16;10(7):1059. doi: 10.3390/biom10071059.
Inflammatory breast cancer (IBC) is a rare yet aggressive breast cancer variant, associated with a poor prognosis. The major challenge for IBC is misdiagnosis due to the lack of molecular biomarkers. We profiled dysregulated expression of microRNAs (miRNAs) in primary samples of IBC and non-IBC tumors using human breast cancer miRNA PCR array. We discovered that 28 miRNAs were dysregulated (10 were upregulated, while 18 were underexpressed) in IBC vs. non-IBC tumors. We identified 128 hub genes, which are putative targets of the differentially expressed miRNAs and modulate important cancer biological processes. Furthermore, our qPCR analysis independently verified a significantly upregulated expression of miR-181b-5p, whereas a significant downregulation of miR-200b-3p, miR-200c-3p, and miR-203a-3p was detected in IBC tumors. Receiver operating characteristic (ROC) curves implied that the four miRNAs individually had a diagnostic accuracy in discriminating patients with IBC from non-IBC and that miR-203a-3p had the highest diagnostic value with an AUC of 0.821. Interestingly, a combination of miR-181b-5p, miR-200b-3p, and miR-200c-3p robustly improved the diagnostic accuracy, with an area under the curve (AUC) of 0.897. Intriguingly, qPCR revealed that the expression of zinc finger E box-binding homeobox 2 () mRNA, the putative target of miR-200b-3p, miR-200c-3p, and miR-203a-3p, was upregulated in IBC tumors. Overall, this study identified a set of miRNAs serving as potential biomarkers with diagnostic relevance for IBC.
炎性乳腺癌(IBC)是一种罕见但侵袭性强的乳腺癌变体,预后不良。由于缺乏分子生物标志物,IBC 的主要挑战是误诊。我们使用人类乳腺癌 miRNA PCR 阵列对 IBC 和非 IBC 肿瘤的原发性样本进行了 microRNA(miRNA)失调表达谱分析。我们发现,与非 IBC 肿瘤相比,IBC 中有 28 个 miRNA 失调(10 个上调,18 个下调)。我们确定了 128 个枢纽基因,这些基因是差异表达 miRNA 的潜在靶基因,并调节重要的癌症生物学过程。此外,我们的 qPCR 分析独立验证了 miR-181b-5p 的表达显著上调,而 miR-200b-3p、miR-200c-3p 和 miR-203a-3p 在 IBC 肿瘤中表达显著下调。接收者操作特征(ROC)曲线表明,这四个 miRNA 单独用于区分 IBC 患者和非 IBC 患者具有诊断准确性,并且 miR-203a-3p 的诊断价值最高,AUC 为 0.821。有趣的是,miR-181b-5p、miR-200b-3p 和 miR-200c-3p 的组合可显著提高诊断准确性,AUC 为 0.897。有趣的是,qPCR 显示锌指 E 盒结合同源盒 2 () mRNA 的表达,即 miR-200b-3p、miR-200c-3p 和 miR-203a-3p 的假定靶标,在 IBC 肿瘤中上调。总的来说,这项研究确定了一组 miRNA,它们作为潜在的生物标志物具有 IBC 的诊断相关性。