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利什曼原虫的翻译起始因子 EIF4E5:晶体结构和相互作用伙伴。

The translation initiation factor EIF4E5 from Leishmania: crystal structure and interacting partners.

机构信息

Departamento de Microbiologia, Instituto Aggeu Magalhães, FIOCRUZ-PE, Av. Moraes Rego s/n, Recife-PE, Brazil.

Programa de Pós-Graduação em Genética, Universidade Federal de Pernambuco, Recife-PE, Brazil.

出版信息

RNA Biol. 2021 Dec;18(12):2433-2449. doi: 10.1080/15476286.2021.1918919. Epub 2021 May 4.

Abstract

The mRNA cap-binding protein, eIF4E, mediates the recognition of the mRNA 5' end and, as part of the heterotrimeric eIF4F complex, facilitates the recruitment of the ribosomal subunits to initiate eukaryotic translation. Various regulatory events involving eIF4E and a second eIF4F subunit, eIF4G, are required for proper control of translation initiation. In pathogenic trypanosomatids, six eIF4Es and five eIF4Gs have been described, several forming different eIF4F-like complexes with yet unresolved roles. EIF4E5 is one of the least known of the trypanosomatid eIF4Es and has not been characterized in species. Here, we used immunoprecipitation assays, combined with mass-spectrometry, to identify major EIF4E5 interacting proteins in . A constitutively expressed, HA-tagged, EIF4E5 co-precipitated mainly with EIF4G1 and binding partners previously described in , EIF4G1-IP, RBP43 and the 14-3-3 proteins. In contrast, no clear co-precipitation with EIF4G2, also previously reported, was observed. EIF4E5 also co-precipitated with protein kinases, possibly associated with cell-cycle regulation, selected RNA binding proteins and histones. Phosphorylated residues were identified and mapped to the -specific C-terminal end. Mutagenesis of the tryptophan residue (W53) postulated to mediate interactions with protein partners or of a neighbouring tryptophan conserved in (W45) did not substantially impair the identified interactions. Finally, the crystal structure of EIF4E5 evidences remarkable differences in the eIF4G interfacing region, when compared with human eIF4E-1 and with its orthologue. Mapping of its C-terminal end near the cap-binding site also imply relevant differences in cap-binding function and/or regulation.

摘要

mRNA 帽结合蛋白 eIF4E 介导 mRNA 5'端的识别,并作为异三聚体 eIF4F 复合物的一部分,促进核糖体亚基的募集以启动真核翻译。涉及 eIF4E 和第二个 eIF4F 亚基 eIF4G 的各种调节事件是正确控制翻译起始所必需的。在致病的原生动物中,已经描述了六个 eIF4E 和五个 eIF4G,其中几个与尚未解决的作用形成不同的 eIF4F 样复合物。EIF4E5 是原生动物 eIF4E 中最不为人知的一种,在 物种中尚未得到表征。在这里,我们使用免疫沉淀测定法,结合质谱法,鉴定了 中主要的 EIF4E5 相互作用蛋白。一个组成型表达的、HA 标记的 EIF4E5 主要与 EIF4G1 和以前在 中描述的结合伙伴 EIF4G1-IP、RBP43 和 14-3-3 蛋白共沉淀。相比之下,没有观察到与 EIF4G2 的明显共沉淀,EIF4G2 以前也有报道过。EIF4E5 还与蛋白激酶共沉淀,这些激酶可能与细胞周期调控、选定的 RNA 结合蛋白和组蛋白有关。鉴定出磷酸化残基并映射到 -特异性 C 端末端。推测与蛋白伴侣相互作用的色氨酸残基(W53)或在 中保守的相邻色氨酸残基(W45)的突变并没有显著损害所鉴定的相互作用。最后, EIF4E5 的晶体结构在与人类 eIF4E-1 和其 同源物的 eIF4G 接口区域表现出显著差异。其 C 端末端靠近帽结合位点的映射也暗示了在帽结合功能和/或调节方面的相关差异。

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