Department of Clinical Pharmacy, Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, Jinan, 250012, People's Republic of China.
Centre for Human Drug Research, Leiden, The Netherlands.
Clin Pharmacokinet. 2021 Nov;60(11):1435-1448. doi: 10.1007/s40262-021-01033-x. Epub 2021 May 27.
Population pharmacokinetic evaluations have been widely used in neonatal pharmacokinetic studies, while machine learning has become a popular approach to solving complex problems in the current era of big data.
The aim of this proof-of-concept study was to evaluate whether combining population pharmacokinetic and machine learning approaches could provide a more accurate prediction of the clearance of renally eliminated drugs in individual neonates.
Six drugs that are primarily eliminated by the kidneys were selected (vancomycin, latamoxef, cefepime, azlocillin, ceftazidime, and amoxicillin) as 'proof of concept' compounds. Individual estimates of clearance obtained from population pharmacokinetic models were used as reference clearances, and diverse machine learning methods and nested cross-validation were adopted and evaluated against these reference clearances. The predictive performance of these combined methods was compared with the performance of two other predictive methods: a covariate-based maturation model and a postmenstrual age and body weight scaling model. Relative error was used to evaluate the different methods.
The extra tree regressor was selected as the best-fit machine learning method. Using the combined method, more than 95% of predictions for all six drugs had a relative error of < 50% and the mean relative error was reduced by an average of 44.3% and 71.3% compared with the other two predictive methods.
A combined population pharmacokinetic and machine learning approach provided improved predictions of individual clearances of renally cleared drugs in neonates. For a new patient treated in clinical practice, individual clearance can be predicted a priori using our model code combined with demographic data.
群体药代动力学评估已广泛应用于新生儿药代动力学研究,而机器学习已成为当前大数据时代解决复杂问题的热门方法。
本概念验证研究旨在评估将群体药代动力学和机器学习方法相结合是否可以更准确地预测个体新生儿肾脏消除药物的清除率。
选择 6 种主要通过肾脏消除的药物(万古霉素、拉他莫头孢、头孢吡肟、阿洛西林、头孢他啶和阿莫西林)作为“概念验证”化合物。从群体药代动力学模型中获得的个体清除率估计值被用作参考清除率,并采用多种机器学习方法和嵌套交叉验证进行评估,并与这些参考清除率进行比较。将这些组合方法的预测性能与另外两种预测方法(基于协变量的成熟模型和月经后年龄和体重标度模型)的性能进行比较。相对误差用于评估不同方法。
选择 Extra Tree 回归器作为最佳拟合的机器学习方法。使用组合方法,对于所有 6 种药物,超过 95%的预测相对误差<50%,平均相对误差平均降低了 44.3%和 71.3%,与另外两种预测方法相比。
群体药代动力学和机器学习相结合的方法提供了对新生儿肾脏清除药物个体清除率的改进预测。对于临床实践中治疗的新患者,可以使用我们的模型代码结合人口统计学数据来预先预测个体清除率。