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一组 COVID-19 供体来源的中和抗体对 SARS-CoV-样病毒表现出广泛的交叉反应性。

Broad cross-reactivity across sarbecoviruses exhibited by a subset of COVID-19 donor-derived neutralizing antibodies.

机构信息

Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.

Laboratory of Retrovirology, The Rockefeller University, New York, NY 10065, USA.

出版信息

Cell Rep. 2021 Sep 28;36(13):109760. doi: 10.1016/j.celrep.2021.109760. Epub 2021 Sep 8.

Abstract

Many anti-severe acute respiratory syndrome coronavirus 2 (anti-SARS-CoV-2) neutralizing antibodies target the angiotensin-converting enzyme 2 (ACE2) binding site on viral spike receptor-binding domains (RBDs). Potent antibodies recognize exposed variable epitopes, often rendering them ineffective against other sarbecoviruses and SARS-CoV-2 variants. Class 4 anti-RBD antibodies against a less-exposed, but more-conserved, cryptic epitope could recognize newly emergent zoonotic sarbecoviruses and variants, but they usually show only weak neutralization potencies. Here, we characterize two class 4 anti-RBD antibodies derived from coronavirus disease 2019 (COVID-19) donors that exhibit breadth and potent neutralization of zoonotic coronaviruses and SARS-CoV-2 variants. C118-RBD and C022-RBD structures reveal orientations that extend from the cryptic epitope to occlude ACE2 binding and CDRH3-RBD main-chain H-bond interactions that extend an RBD β sheet, thus reducing sensitivity to RBD side-chain changes. A C118-spike trimer structure reveals rotated RBDs that allow access to the cryptic epitope and the potential for intra-spike crosslinking to increase avidity. These studies facilitate vaccine design and illustrate potential advantages of class 4 RBD-binding antibody therapeutics.

摘要

许多针对严重急性呼吸综合征冠状病毒 2(anti-SARS-CoV-2)的中和抗体靶向病毒刺突受体结合域(RBD)上的血管紧张素转化酶 2(ACE2)结合位点。有效的抗体识别暴露的可变表位,这往往使它们对其他沙贝科病毒和 SARS-CoV-2 变体无效。针对不太暴露但更保守的隐蔽表位的 4 类抗 RBD 抗体可以识别新出现的人畜共患沙贝科病毒和变体,但它们通常只显示出较弱的中和效力。在这里,我们描述了两种从 COVID-19 供体中衍生出的 4 类抗 RBD 抗体,它们具有针对人畜共患冠状病毒和 SARS-CoV-2 变体的广度和强大的中和能力。C118-RBD 和 C022-RBD 的结构揭示了从隐蔽表位延伸的取向,以阻断 ACE2 结合和延伸 RBD β 片的 CDRH3-RBD 主链 H 键相互作用,从而降低对 RBD 侧链变化的敏感性。C118-刺突三聚体结构揭示了旋转的 RBD,允许进入隐蔽表位,并有可能通过刺突内交联增加亲和力。这些研究促进了疫苗设计,并说明了 4 类 RBD 结合抗体治疗的潜在优势。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5816/8423902/7e315db170d8/fx1_lrg.jpg

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