Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125, USA.
Laboratory of Retrovirology, The Rockefeller University, New York, NY 10065, USA.
Cell Rep. 2021 Sep 28;36(13):109760. doi: 10.1016/j.celrep.2021.109760. Epub 2021 Sep 8.
Many anti-severe acute respiratory syndrome coronavirus 2 (anti-SARS-CoV-2) neutralizing antibodies target the angiotensin-converting enzyme 2 (ACE2) binding site on viral spike receptor-binding domains (RBDs). Potent antibodies recognize exposed variable epitopes, often rendering them ineffective against other sarbecoviruses and SARS-CoV-2 variants. Class 4 anti-RBD antibodies against a less-exposed, but more-conserved, cryptic epitope could recognize newly emergent zoonotic sarbecoviruses and variants, but they usually show only weak neutralization potencies. Here, we characterize two class 4 anti-RBD antibodies derived from coronavirus disease 2019 (COVID-19) donors that exhibit breadth and potent neutralization of zoonotic coronaviruses and SARS-CoV-2 variants. C118-RBD and C022-RBD structures reveal orientations that extend from the cryptic epitope to occlude ACE2 binding and CDRH3-RBD main-chain H-bond interactions that extend an RBD β sheet, thus reducing sensitivity to RBD side-chain changes. A C118-spike trimer structure reveals rotated RBDs that allow access to the cryptic epitope and the potential for intra-spike crosslinking to increase avidity. These studies facilitate vaccine design and illustrate potential advantages of class 4 RBD-binding antibody therapeutics.
许多针对严重急性呼吸综合征冠状病毒 2(anti-SARS-CoV-2)的中和抗体靶向病毒刺突受体结合域(RBD)上的血管紧张素转化酶 2(ACE2)结合位点。有效的抗体识别暴露的可变表位,这往往使它们对其他沙贝科病毒和 SARS-CoV-2 变体无效。针对不太暴露但更保守的隐蔽表位的 4 类抗 RBD 抗体可以识别新出现的人畜共患沙贝科病毒和变体,但它们通常只显示出较弱的中和效力。在这里,我们描述了两种从 COVID-19 供体中衍生出的 4 类抗 RBD 抗体,它们具有针对人畜共患冠状病毒和 SARS-CoV-2 变体的广度和强大的中和能力。C118-RBD 和 C022-RBD 的结构揭示了从隐蔽表位延伸的取向,以阻断 ACE2 结合和延伸 RBD β 片的 CDRH3-RBD 主链 H 键相互作用,从而降低对 RBD 侧链变化的敏感性。C118-刺突三聚体结构揭示了旋转的 RBD,允许进入隐蔽表位,并有可能通过刺突内交联增加亲和力。这些研究促进了疫苗设计,并说明了 4 类 RBD 结合抗体治疗的潜在优势。