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代谢通道化:预测、推断和证据。

Metabolic channeling: predictions, deductions, and evidence.

机构信息

Huck Institutes of Life Sciences, Pennsylvania State University, University Park, PA 16802, USA.

Department of Chemistry, Pennsylvania State University, University Park, PA 16802, USA.

出版信息

Mol Cell. 2021 Sep 16;81(18):3775-3785. doi: 10.1016/j.molcel.2021.08.030.

Abstract

With the elucidation of myriad anabolic and catabolic enzyme-catalyzed cellular pathways crisscrossing each other, an obvious question arose: how could these networks operate with maximal catalytic efficiency and minimal interference? A logical answer was the postulate of metabolic channeling, which in its simplest embodiment assumes that the product generated by one enzyme passes directly to a second without diffusion into the surrounding medium. This tight coupling of activities might increase a pathway's metabolic flux and/or serve to sequester unstable/toxic/reactive intermediates as well as prevent their access to other networks. Here, we present evidence for this concept, commencing with enzymes that feature a physical molecular tunnel, to multi-enzyme complexes that retain pathway substrates through electrostatics or enclosures, and finally to metabolons that feature collections of enzymes assembled into clusters with variable stoichiometric composition. Lastly, we discuss the advantages of reversibly assembled metabolons in the context of the purinosome, the purine biosynthesis metabolon.

摘要

随着无数分解代谢和合成代谢酶催化的细胞途径相互交织的阐明,一个明显的问题出现了:这些网络如何以最大的催化效率和最小的干扰来运作?一个合乎逻辑的答案是代谢通道化的假设,其最简单的表现形式假设一个酶产生的产物直接传递给第二个酶,而不会扩散到周围介质中。这种活性的紧密偶联可能会增加途径的代谢通量,或者有助于隔离不稳定/有毒/反应性中间产物,并防止它们进入其他网络。在这里,我们从具有物理分子隧道的酶开始,介绍了这个概念的证据,到保留途径底物的多酶复合物,通过静电或外壳,最后到具有可变计量组成的酶集合组装成簇的代谢物。最后,我们讨论了可逆组装的代谢物在嘌呤体(嘌呤生物合成代谢物)背景下的优势。

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