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从单子叶植物和双子叶植物中洞察 VvGH3 基因的进化关系表明,VvGH3-9 负调控转基因拟南芥的耐旱性。

Insight into VvGH3 genes evolutional relationship from monocotyledons and dicotyledons reveals that VvGH3-9 negatively regulates the drought tolerance in transgenic Arabidopsis.

机构信息

College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.

College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.

出版信息

Plant Physiol Biochem. 2022 Feb 1;172:70-86. doi: 10.1016/j.plaphy.2022.01.005. Epub 2022 Jan 8.

Abstract

The Gretchen Hagen3 (GH3) gene family is necessary for growth and development in plants and is regulated by osmotic stress and various hormones. Although it has been reported in many plants, the evolutionary relationship of GH3 in grape has not been systematically analyzed from the perspective of monocotyledonous and dicotyledonous. This study identified and analyzed 188 GH3 genes, which were distinctly divided into 9 subgroups, and found these subgroups have obviously been clustered between monocotyledonous and dicotyledonous. VvGH3-x genes had higher synteny with apple and Arabidopsis than that of rice, and the average Ka/Ks value in monocotyledons was higher than that of dicotyledons. The codon usage index showed that monocotyledons preferred to use G3s, C3s, and GC3s, while dicotyledons preferred to use A3s and T3s. The GH3 genes of grape exhibited different expression patterns in various tissues, different abiotic stresses, and hormonal treatments. The subcellular localization showed that VvGH3-9 was expressed in the nucleus and cytoplasm. Additionally, under 20% PEG treatment, the IAA and ABA contents, relative expression levels of VvGH3-9, relative electrical conductivity (REC), as well as MDA were obviously increased in VvGH3-9 overexpression lines at 72 h. In contrast, compared to WT, the contents of proline and HO, the activities of POD, SOD, and CAT, and the relative expression levels of drought responsive genes were significantly decreased in overexpressing lines. Collectively, this study provided helpful insight for the evolution of GH3 genes and presented some possibilities to study the functions of GH3 genes in monocotyledons and dicotyledons.

摘要

GH3 基因家族在植物的生长发育中起着重要作用,并受到渗透胁迫和各种激素的调控。虽然在许多植物中都有报道,但从单子叶植物和双子叶植物的角度来看,葡萄中 GH3 的进化关系尚未得到系统分析。本研究鉴定和分析了 188 个 GH3 基因,这些基因明显分为 9 个亚组,并发现这些亚组在单子叶植物和双子叶植物之间明显聚类。VvGH3-x 基因与苹果和拟南芥的同源性高于与水稻的同源性,并且单子叶植物的平均 Ka/Ks 值高于双子叶植物。密码子使用指数表明,单子叶植物更喜欢使用 G3s、C3s 和 GC3s,而双子叶植物更喜欢使用 A3s 和 T3s。葡萄 GH3 基因在不同组织、不同非生物胁迫和激素处理下表现出不同的表达模式。亚细胞定位表明,VvGH3-9 在核和细胞质中表达。此外,在 20%PEG 处理下,VvGH3-9 过表达系在 72 h 时 IAA 和 ABA 含量、VvGH3-9 的相对表达水平、相对电导率 (REC) 以及 MDA 明显增加,而脯氨酸和 HO 的含量、POD、SOD 和 CAT 的活性以及干旱响应基因的相对表达水平在过表达系中明显低于 WT。总之,本研究为 GH3 基因的进化提供了有价值的见解,并为研究 GH3 基因在单子叶植物和双子叶植物中的功能提供了一些可能性。

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