Laboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, Tikhoretsky Av., 4, St. Petersburg, 194064, Russia.
Department of Molecular Medicine and USF Health Byrd Alzheimer's Research Institute, Morsani College of Medicine, University of South Florida, 12901 Bruce B. Downs Blvd. MDC07, Tampa, FL, 33612, USA.
Cell Mol Life Sci. 2022 Apr 20;79(5):251. doi: 10.1007/s00018-022-04276-4.
At the turn of the twenty-first century, fundamental changes took place in the understanding of the structure and function of proteins and then in the appreciation of the intracellular space organization. A rather mechanistic model of the organization of living matter, where the function of proteins is determined by their rigid globular structure, and the intracellular processes occur in rigidly determined compartments, was replaced by an idea that highly dynamic and multifunctional "soft matter" lies at the heart of all living things. According this "new view", the most important role in the spatio-temporal organization of the intracellular space is played by liquid-liquid phase transitions of biopolymers. These self-organizing cellular compartments are open dynamic systems existing at the edge of chaos. They are characterized by the exceptional structural and compositional dynamics, and their multicomponent nature and polyfunctionality provide means for the finely tuned regulation of various intracellular processes. Changes in the external conditions can cause a disruption of the biogenesis of these cellular bodies leading to the irreversible aggregation of their constituent proteins, followed by the transition to a gel-like state and the emergence of amyloid fibrils. This work represents a historical overview of changes in our understanding of the intracellular space compartmentalization. It also reflects methodological breakthroughs that led to a change in paradigms in this area of science and discusses modern ideas about the organization of the intracellular space. It is emphasized here that the membrane-less organelles have to combine a certain resistance to the changes in their environment and, at the same time, show high sensitivity to the external signals, which ensures the normal functioning of the cell.
在二十一世纪之交,人们对蛋白质的结构和功能的理解发生了根本性的变化,随后对细胞内空间组织的认识也发生了变化。一种相当机械的生命物质组织模型,其中蛋白质的功能由其刚性的球状结构决定,细胞内过程发生在刚性确定的隔室中,这种模型被一种观念所取代,即高度动态和多功能的“软物质”是所有生命的核心。根据这一“新观点”,生物聚合物的液-液相转变在细胞内空间的时空组织中起着最重要的作用。这些自组织的细胞隔室是存在于混沌边缘的开放动态系统。它们的特点是结构和组成动态异常,其多组分性质和多功能性为精细调节各种细胞内过程提供了手段。外部条件的变化可能导致这些细胞体的生物发生中断,导致其组成蛋白不可逆聚集,随后过渡到凝胶状状态并出现淀粉样纤维。这项工作代表了我们对细胞内空间区隔化理解的历史概述。它还反映了导致该科学领域范式转变的方法突破,并讨论了细胞内空间组织的现代观念。这里强调的是,无膜细胞器必须具有一定的环境变化抗性,同时对外部信号表现出高度敏感性,这确保了细胞的正常功能。