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酒精性肝病的表观遗传学

Epigenetics of alcohol-related liver diseases.

作者信息

Habash Nawras W, Sehrawat Tejasav S, Shah Vijay H, Cao Sheng

机构信息

Gastroenterology Research Unit, Division of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN USA.

出版信息

JHEP Rep. 2022 Mar 10;4(5):100466. doi: 10.1016/j.jhepr.2022.100466. eCollection 2022 May.

Abstract

Alcohol-related liver disease (ARLD) is a primary cause of chronic liver disease in the United States. Despite advances in the diagnosis and management of ARLD, it remains a major public health problem associated with significant morbidity and mortality, emphasising the need to adopt novel approaches to the study of ARLD and its complications. Epigenetic changes are increasingly being recognised as contributing to the pathogenesis of multiple disease states. Harnessing the power of innovative technologies for the study of epigenetics (, next-generation sequencing, DNA methylation assays, histone modification profiling and computational techniques like machine learning) has resulted in a seismic shift in our understanding of the pathophysiology of ARLD. Knowledge of these techniques and advances is of paramount importance for the practicing hepatologist and researchers alike. Accordingly, in this review article we will summarise the current knowledge about alcohol-induced epigenetic alterations in the context of ARLD, including but not limited to, DNA hyper/hypo methylation, histone modifications, changes in non-coding RNA, 3D chromatin architecture and enhancer-promoter interactions. Additionally, we will discuss the state-of-the-art techniques used in the study of ARLD ( single-cell sequencing). We will also highlight the epigenetic regulation of chemokines and their proinflammatory role in the context of ARLD. Lastly, we will examine the clinical applications of epigenetics in the diagnosis and management of ARLD.

摘要

酒精性肝病(ARLD)是美国慢性肝病的主要病因。尽管在ARLD的诊断和管理方面取得了进展,但它仍然是一个与高发病率和死亡率相关的重大公共卫生问题,这凸显了采用新方法研究ARLD及其并发症的必要性。表观遗传变化越来越被认为是多种疾病状态发病机制的一个因素。利用创新技术研究表观遗传学(下一代测序、DNA甲基化检测、组蛋白修饰分析以及机器学习等计算技术)已使我们对ARLD病理生理学的理解发生了巨大转变。对于执业肝病学家和研究人员来说,了解这些技术和进展至关重要。因此,在这篇综述文章中,我们将总结在ARLD背景下关于酒精诱导的表观遗传改变的现有知识,包括但不限于DNA高甲基化/低甲基化、组蛋白修饰、非编码RNA变化、三维染色质结构以及增强子 - 启动子相互作用。此外,我们将讨论用于研究ARLD的前沿技术(单细胞测序)。我们还将强调趋化因子的表观遗传调控及其在ARLD背景下的促炎作用。最后,我们将探讨表观遗传学在ARLD诊断和管理中的临床应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65ec/9018389/1a174d1d5e9f/gr1.jpg

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