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噻吩 -2- 碳酰肼的合成及酰胺亚胺质子转移互变异构:X射线衍射、密度泛函理论/热重分析计算、DNA对接、热重分析及等转化率动力学FWO和KAS模型

Synthesis and amide imidic prototropic tautomerization in thiophene-2-carbohydrazide: XRD, DFT/HSA-computation, DNA-docking, TG and isoconversional kinetics FWO and KAS models.

作者信息

Al-Zaqri Nabil, Khatib Tamer, Alsalme Ali, Alharthi Fahad A, Zarrouk Abdelkader, Warad Ismail

机构信息

Department of Chemistry, College of Science, King Saud University P. O. Box 2455 Riyadh 11451 Saudi Arabia.

Department of Energy Engineering and Environment, An-Najah National University Nablus 97300 Palestine.

出版信息

RSC Adv. 2020 Jan 10;10(4):2037-2048. doi: 10.1039/c9ra09831c. eCollection 2020 Jan 8.

Abstract

Thiophene-2-carbohydrazide as a novel small-molecule amide tautomer has been synthesized with an acceptable yield under microwave radiation (MW) conditions. The amide imidic thiophene-2-carbohydrazide prototropic tautomerization single proton intramigration was computed using the DFT B3LYP/6-311G(d,p) level of theory. The -isomer amide structure of thiophene-2-carbohydrazide was proved by XRD and is considered to be the kinetically favored isomer. The DFT-structure parameters were compared to their corresponding XRD-experimental parameters. Several H-bond interactions were detected in the crystal lattice experimentally using the XRD-packing model then correlated to MEP and HSA calculations. The manual and calculated electronic parameters such as, frontier molecular orbital energies, excitation energy, absorption, dipole moment, DOS, GRD quantum parameters and TD-SCF/B3LYP were DFT computed. The thiophene-2-carbohydrazide isomers together with their prototropic ()/()-thiophene-2-carbohydrazonic acid tautomers were docked against 1BNA DNA. FWO and KAS isoconversional kinetic methods were applied, and the thermal behavior and estimated - relations were determined.

摘要

噻吩 - 2 - 碳酰肼作为一种新型的小分子酰胺互变异构体,已在微波辐射(MW)条件下以可接受的产率合成。使用密度泛函理论(DFT)的B3LYP/6 - 311G(d,p)水平计算了酰胺亚胺基噻吩 - 2 - 碳酰肼的质子转移互变异构化(单质子内迁移)。通过X射线衍射(XRD)证实了噻吩 - 2 - 碳酰肼的 - 异构体酰胺结构,并认为其是动力学上有利的异构体。将DFT结构参数与其相应的XRD实验参数进行了比较。使用XRD堆积模型在晶格中实验检测到几种氢键相互作用,然后将其与分子静电势(MEP)和分子表面分析(HSA)计算相关联。通过DFT计算了手动和计算得到的电子参数,如前线分子轨道能量、激发能、吸收、偶极矩、态密度(DOS)、广义反应密度(GRD)量子参数以及含时密度泛函理论(TD - SCF)/B3LYP。将噻吩 - 2 - 碳酰肼异构体及其质子转移()/() - 噻吩 - 2 - 碳酰腙互变异构体与1BNA DNA进行对接。应用了弗里德曼 - 沃尔夫(FWO)和基辛格 - 阿夫拉米(KAS)等温转化动力学方法,并确定了热行为和估计的 - 关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d891/9048253/c737f6c51107/c9ra09831c-s1.jpg

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