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文本挖掘工具可节省标题-摘要筛选工作量:性能评估与单人筛选的比较。

A text-mining tool generated title-abstract screening workload savings: performance evaluation versus single-human screening.

机构信息

National Centre for Pharmacoeconomics, Old Stone Building, Trinity Centre for Health Sciences, St James's Hospital, Dublin 8, Ireland; Department of Pharmacology and Therapeutics, Trinity Centre for Health Sciences, St James's Hospital, Dublin 8, Ireland.

National Centre for Pharmacoeconomics, Old Stone Building, Trinity Centre for Health Sciences, St James's Hospital, Dublin 8, Ireland; Department of Pharmacology and Therapeutics, Trinity Centre for Health Sciences, St James's Hospital, Dublin 8, Ireland.

出版信息

J Clin Epidemiol. 2022 Sep;149:53-59. doi: 10.1016/j.jclinepi.2022.05.017. Epub 2022 May 30.

Abstract

BACKGROUND AND OBJECTIVES

Text-mining tool, Abstrackr, may potentially reduce the workload burden of title and abstract screening (Stage 1), using screening prioritization and truncation. This study aimed to evaluate the performance of Abstrackr's text-mining functions ('Abstrackr-assisted screening'; screening undertaken by a single-human screener and Abstrackr) vs. Single-human screening.

METHODS

A systematic review of treatments for relapsed/refractory diffuse large B cell lymphoma (n = 7,723) was used. Citations, uploaded to Abstrackr, were screened by a human screener until a pre-specified maximum prediction score of 0.39540 was reached. Abstrackr's predictions were compared with the judgments of a second, human screener (who screened all citations in Covidence). The performance metrics were sensitivity, specificity, precision, false negative rate, proportion of relevant citations missed, workload savings, and time savings.

RESULTS

Abstrackr reduced Stage 1 workload by 67% (5.4 days), when compared with Single-human screening. Sensitivity was high (91%). The false negative rate at Stage 1 was 9%; however, none of those citations were included following full-text screening. The high proportion of false positives (n = 2,001) resulted in low specificity (72%) and precision (15.5%).

CONCLUSION

Abstrackr-assisted screening provided Stage 1 workload savings that did not come at the expense of omitting relevant citations. However, Abstrackr overestimated citation relevance, which may have negative workload implications at full-text screening.

摘要

背景与目的

文本挖掘工具 Abstrackr 可能通过筛选优先级和截断来减少标题和摘要筛选(第 1 阶段)的工作量负担。本研究旨在评估 Abstrackr 的文本挖掘功能(“Abstrackr 辅助筛选”;由单个筛选员和 Abstrackr 进行筛选)与单人筛选的性能。

方法

系统综述了治疗复发性/难治性弥漫性大 B 细胞淋巴瘤的方法(n=7723)。将上传到 Abstrackr 的引用由人工筛选员筛选,直到达到预先指定的最大预测分数 0.39540。Abstrackr 的预测结果与 Covidence 中另一位人工筛选员(筛选所有引用)的判断结果进行了比较。评估的性能指标包括敏感性、特异性、精度、假阴性率、遗漏的相关引用比例、工作量节省和时间节省。

结果

与单人筛选相比,Abstrackr 减少了第 1 阶段 67%的工作量(5.4 天)。敏感性很高(91%)。第 1 阶段的假阴性率为 9%;然而,在全文筛选后,没有引用这些文献。高比例的假阳性(n=2001)导致特异性(72%)和精度(15.5%)较低。

结论

Abstrackr 辅助筛选在不遗漏相关引用的情况下节省了第 1 阶段的工作量。然而,Abstrackr 高估了引用的相关性,这可能会对全文筛选的工作量产生负面影响。

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