Laboratory for Genomics, Foundation Jean Dausset - CEPH, Paris, France.
Laboratory of Excellence GenMed, Paris, France.
Aging (Albany NY). 2022 Oct 3;14(19):7718-7733. doi: 10.18632/aging.204316.
Aging is a progressive time-dependent biological process affecting differentially individuals, who can sometimes present exceptional longevity. Epigenetic alterations are one of the hallmarks of aging, which comprise the epigenetic drift and clock at DNA methylation level. In the present study, we estimated the DNA methylation-based age (DNAmage) using four epigenetic clocks based on a small number of CpGs in French centenarians and semi-supercentenarians (CSSC, n=214) as well as nonagenarians' and centenarians' offspring (NCO, n=143) compared to individuals from the French general population (CG, n=149). DNA methylation analysis of the nine CpGs included in the epigenetic clocks showed high correlation with chronological age (-0.66>R>0.54) and also the presence of an epigenetic drift for four CpGs that was only visible in CSSC. DNAmage analysis showed that CSSC and to a lesser extend NCO present a younger DNAmage than their chronological age (15-28.5 years for CSSC, 4.4-11.5 years for NCO and 4.2-8.2 years for CG), which were strongly significant in CSSC compared to CG (p-values<2.2e-16). These differences suggest that epigenetic aging and potentially biological aging are slowed in exceptionally long-lived individuals and that epigenetic clocks based on a small number of CpGs are sufficient to reveal alterations of the global epigenetic clock.
衰老是一个渐进的、与时间相关的生物学过程,不同个体受到的影响也不同,有些人甚至可能拥有异常的长寿。表观遗传改变是衰老的特征之一,包括 DNA 甲基化水平上的表观遗传漂移和时钟。在本研究中,我们使用基于少数 CpG 的四个表观遗传时钟,估计了法国百岁老人和半超级百岁老人(CSSC,n=214)以及非百岁老人和百岁老人后代(NCO,n=143)的 DNA 甲基化年龄(DNAmage),并将其与来自法国普通人群(CG,n=149)的个体进行了比较。对包含在表观遗传时钟中的 9 个 CpG 的 DNA 甲基化分析显示,与实际年龄高度相关(-0.66>R>0.54),并且存在 4 个 CpG 的表观遗传漂移,这种漂移仅在 CSSC 中可见。DNAmage 分析表明,CSSC 以及在较小程度上的 NCO 比他们的实际年龄具有更年轻的 DNAmage(CSSC 为 15-28.5 岁,NCO 为 4.4-11.5 岁,CG 为 4.2-8.2 岁),这在 CSSC 与 CG 之间具有很强的显著性(p 值<2.2e-16)。这些差异表明,在异常长寿的个体中,表观遗传衰老和潜在的生物衰老速度较慢,并且基于少数 CpG 的表观遗传时钟足以揭示全局表观遗传时钟的改变。