Department of Biomedical Sciences, College of Veterinary Medicine, King Faisal University, Al-Hofuf, Al-Ahsa, Saudi Arabia.
Department of Pharmacology, Faculty of Veterinary Medicine, Kafrelshikh University, Kafrelshikh, Egypt.
PLoS One. 2023 May 18;18(5):e0285965. doi: 10.1371/journal.pone.0285965. eCollection 2023.
Kidney disorders are among the most common diseases and there is a scarcity of effective treatments for chronic kidney disease. There has been a progressive improvement in specific flavonoids for protective effects against kidney diseases. Flavonoids inhibit the regulatory enzymes to control inflammation-related diseases. In the present study, a hybrid approach of molecular docking analyses and molecular dynamic simulation was followed by principal component analyses and a dynamics cross-correlation matrix. In the present study, the top-ranked five flavonoids were reported, and the maximum binding affinity was observed against AIM2. Molecular docking analyses revealed that Glu_186, Phe_187, Lys_245, Glu_248, Ile_263, and Asn_265 are potent residues against AIM2 for ligand-receptor interactions. Extensive in silico analyses suggested that procyanidin is a potential molecule against AIM2. Moreover, the site-directed mutagenesis for the reported interacting residues of AIM2 could be important for further in vitro analyses. The observed novel results based on extensive computational analyses may be significant for potential drug design against renal disorders by targeting AIM2.
肾脏疾病是最常见的疾病之一,而慢性肾脏疾病的有效治疗方法却很匮乏。某些类黄酮在预防肾脏疾病方面的保护作用已经得到了逐步改善。类黄酮可以抑制调节酶,从而控制与炎症相关的疾病。在本研究中,采用了分子对接分析和分子动力学模拟的混合方法,随后进行了主成分分析和动力学互相关矩阵分析。在本研究中,报告了排名前五的类黄酮,它们对 AIM2 的最大结合亲和力最高。分子对接分析表明,AIM2 中的 Glu_186、Phe_187、Lys_245、Glu_248、Ile_263 和 Asn_265 是针对配体-受体相互作用的有效残基。广泛的计算机分析表明,原花青素是一种针对 AIM2 的潜在分子。此外,针对报告的 AIM2 相互作用残基进行的定点突变可能对进一步的体外分析很重要。基于广泛的计算分析观察到的新结果,可能对通过靶向 AIM2 设计治疗肾脏疾病的潜在药物具有重要意义。