Guo Lizhen, Tang Min, Luo Shiqi, Zhou Xin
Department of Entomology, College of Plant Protection, China Agricultural University, Beijing 100193, China.
Sanya Institute of China Agricultural University, Sanya 572000, China.
Insects. 2023 Sep 29;14(10):794. doi: 10.3390/insects14100794.
Antibiotic resistance is a significant and growing threat to global public health. However, antimicrobial peptides (AMPs) have shown promise as they exhibit a broad spectrum of antibacterial activities with low potential for resistance development. Insects, which inhabit a wide range of environments and are incredibly diverse, remain largely unexplored as a source of novel AMPs. To address this, we conducted a screening of the representative transcriptomes from the 1000 Insect Transcriptome Evolution (1KITE) dataset, focusing on the homologous reference genes of Cecropins, the first identified AMPs in insects known for its high efficiency. Our analysis identified 108 Cecropin genes from 105 insect transcriptomes, covering all major hexapod lineages. We validated the gene sequences and synthesized mature peptides for three identified Cecropin genes. Through minimal inhibition concentration and agar diffusion assays, we confirmed that these peptides exhibited antimicrobial activities against Gram-negative bacteria. Similar to the known Cecropin, the three Cecropins adopted an alpha-helical conformation in membrane-like environments, efficiently disrupting bacterial membranes through permeabilization. Importantly, none of the three Cecropins demonstrated cytotoxicity in erythrocyte hemolysis tests, suggesting their safety in real-world applications. Overall, this newly developed methodology provides a high-throughput bioinformatic pipeline for the discovery of AMP, taking advantage of the expanding genomic resources available for diverse organisms.
抗生素耐药性是对全球公共卫生的一个重大且日益严重的威胁。然而,抗菌肽(AMPs)已展现出前景,因为它们具有广谱抗菌活性,且产生耐药性的可能性较低。昆虫栖息于广泛的环境中,种类极其多样,但作为新型抗菌肽的来源在很大程度上仍未被探索。为解决这一问题,我们对来自1000种昆虫转录组进化(1KITE)数据集的代表性转录组进行了筛选,重点关注天蚕素的同源参考基因,天蚕素是昆虫中最早被鉴定出的抗菌肽,以其高效性而闻名。我们的分析从105个昆虫转录组中鉴定出108个天蚕素基因,涵盖了所有主要的六足动物谱系。我们对三个鉴定出的天蚕素基因的序列进行了验证,并合成了成熟肽。通过最小抑菌浓度和琼脂扩散试验,我们证实这些肽对革兰氏阴性菌具有抗菌活性。与已知的天蚕素类似,这三种天蚕素在类似膜的环境中采用α-螺旋构象,通过通透作用有效地破坏细菌膜。重要的是,这三种天蚕素在红细胞溶血试验中均未表现出细胞毒性,表明它们在实际应用中的安全性。总体而言,这种新开发的方法利用了可用于多种生物的不断扩展的基因组资源,为发现抗菌肽提供了一个高通量生物信息学管道。