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中国奶牛乳腺炎分离的肺炎克雷伯菌 K57 荚膜血清型的比较基因组分析。

Comparative genomic analyses of Klebsiella pneumoniae K57 capsule serotypes isolated from bovine mastitis in China.

机构信息

Department of Clinical Veterinary Medicine, College of Veterinary Medicine, China Agricultural University, Beijing 100193, China.

Faculty of Veterinary Medicine, University of Calgary, Calgary, AB, T2N 4N1, Canada.

出版信息

J Dairy Sci. 2024 May;107(5):3114-3126. doi: 10.3168/jds.2023-23721. Epub 2023 Nov 8.

Abstract

Klebsiella pneumoniae can cause severe clinical mastitis in dairy cows, with K. pneumoniae type K57 (K57-KP) being the most common capsular serotype. To identify virulence factors and antimicrobial-resistance (AMR) genes of K57-KP with varying virulence, Galleria mellonella (greater wax moth) larvae were infected as a screening model to characterize virulence of 90 K57-KP strains, with 10 and 11 strains defined as virulent or attenuated, respectively, based on larval survival rates. Next, virulence of these 21 isolates was subsequently confirmed in adhesion and lactate dehydrogenase release assays, using bovine mammary epithelial cells cultured in vitro. Finally, genes associated with virulence and AMR were characterize with whole-genome sequencing. These 21 K57-KP strains were designated into 16 sequence types based on multi-locus sequence typing and allocated in phylogenetic analysis based on single nucleotide polymorphisms. We found great genetic diversity among isolates. In addition, adhesion-associated genes (e.g., fimA, sfaA, and focA) aminoglycoside-resistance genes (aph(6)-Id, strAB) were associated with virulence. This study provided new knowledge regarding virulence of K57-KP associated with bovine mastitis, which may inform development of novel diagnostic tools and prevention strategies for bovine mastitis.

摘要

肺炎克雷伯菌可引起奶牛严重临床乳腺炎,其中 K 型 57 荚膜血清型(K57-KP)最为常见。为了鉴定不同毒力的 K57-KP 的毒力因子和抗生素耐药(AMR)基因,我们使用大蜡螟(greater wax moth)幼虫作为筛选模型来表征 90 株 K57-KP 菌株的毒力,根据幼虫存活率,将 10 株和 11 株分别定义为毒力株和减毒株。接下来,我们使用体外培养的牛乳腺上皮细胞,在粘附和乳酸脱氢酶释放试验中进一步确认了这 21 株分离株的毒力。最后,我们通过全基因组测序对与毒力和 AMR 相关的基因进行了特征分析。根据多位点序列分型,这 21 株 K57-KP 菌株被分为 16 个序列型,并根据单核苷酸多态性进行了系统发育分析。我们发现分离株之间存在很大的遗传多样性。此外,与粘附相关的基因(如 fimA、sfaA 和 focA)和氨基糖苷类耐药基因(aph(6)-Id、strAB)与毒力有关。本研究为与奶牛乳腺炎相关的 K57-KP 的毒力提供了新的知识,这可能为奶牛乳腺炎的新型诊断工具和预防策略的开发提供信息。

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