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单线虫定量蛋白质组学揭示了同基因秀丽隐杆线虫的衰老异质性。

Single-worm quantitative proteomics reveals aging heterogeneity in isogenic Caenorhabditis elegans.

作者信息

Zhu Tian-Yi, Li Shang-Tong, Liu Dan-Dan, Zhang Xiajun, Zhou Lianqi, Zhou Rong, Yang Bing

机构信息

Zhejiang Provincial Key Laboratory for Cancer Molecular Cell Biology, Life Sciences Institute, Zhejiang University, Hangzhou, China.

Cancer Center, Zhejiang University, Hangzhou, China.

出版信息

Aging Cell. 2024 Mar;23(3):e14055. doi: 10.1111/acel.14055. Epub 2023 Dec 3.

Abstract

The heterogeneity of aging has been investigated at cellular and organic levels in the mouse model and human, but the exploration of aging heterogeneity at whole-organism level is lacking. C. elegans is an ideal model organism for studying this question as they are self-fertilized and cultured in the same chamber. Despite the tremendous progress made in single-cell proteomic analysis, there is few single-worm proteomics studies about aging. Here, we apply single-worm quantitative mass spectrometry to quantify the heterogenous proteomic changes during aging across individuals, a total of 3524 proteins from 157 C. eleagns individuals were quantified. A reconstructed C. elegans aging trajectory and proteomic landscape of fast-aging individuals were used to analyze the heterogeneity of C. elegans aging. We characterized inter-individual proteomic variation during aging and revealed contributing factors that distinguish fast-aging individuals from their siblings.

摘要

衰老的异质性已在小鼠模型和人类中从细胞和机体水平进行了研究,但在全生物体水平上对衰老异质性的探索尚显不足。秀丽隐杆线虫是研究这个问题的理想模式生物,因为它们是自体受精且在同一培养室中培养。尽管单细胞蛋白质组学分析取得了巨大进展,但关于衰老的单条线虫蛋白质组学研究却很少。在此,我们应用单条线虫定量质谱法来量化衰老过程中个体间蛋白质组的异质性变化,共对157条秀丽隐杆线虫个体中的3524种蛋白质进行了定量。利用重建的秀丽隐杆线虫衰老轨迹和快速衰老个体的蛋白质组图谱来分析秀丽隐杆线虫衰老的异质性。我们对衰老过程中个体间的蛋白质组变异进行了表征,并揭示了区分快速衰老个体与其同胞的影响因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/13f0/10928571/e4cd1f970847/ACEL-23-e14055-g007.jpg

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