Department of Gastrointestinal Surgery, Second Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China.
Jiangxi Province Key Laboratory of Molecular Medicine, Second Affiliated Hospital of Nanchang University, Nanchang, Jiangxi, China.
Sci Rep. 2023 Dec 4;13(1):21358. doi: 10.1038/s41598-023-48623-2.
The clinical significance and comprehensive characteristics of chemokines and chemokine receptors in female patients with advanced colorectal adenocarcinoma have not ever been reported. Our study explored the expression profiles of chemokines and chemokine receptors and constructed a chemokine- and chemokine receptor-based signature in female patients with advanced colorectal adenocarcinoma. Four independent cohorts containing 1335 patients were enrolled in our study. Univariate Cox regression and least absolute shrinkage and selection operator (LASSO) analyses were performed to construct the signature. CIBERSORT was used to evaluate the landscape of immune cell infiltration. Thirty-two pairs of tissue specimens of female advanced colorectal cancer (CRC) patients and two CRC cell lines were used to validate the signature in vitro. Quantitative real-time PCR and western blotting were performed to validate the mRNA and protein expression levels of signature genes. EdU and colony formation assays were performed to examine proliferative ability. Transwell and wound healing assays were used to evaluate cell invasion and migration capacity. During the signature construction and validation process, we found that the signature was more applicable to female patients with advanced colorectal adenocarcinoma. Hence, the subsequent study mainly focused on the particular subgroup. Enrichment analyses revealed that the signature was closely related to immunity. The landscape of immune cell infiltration presented that the signature was significantly associated with T cells CD8 and neutrophils. Gene set enrichment analysis (GSEA) confirmed that the high-risk group was chiefly enriched in the tumor-promoting related pathways and biological processes, whereas the low-risk group was mainly enriched in anti-tumor immune response pathways and biological processes. The signature was closely correlated with CTLA4, PDL1, PDL2, TMB, MSI, and TIDE, indicating that our signature could serve as a robust biomarker for immunotherapy and chemotherapy response. ROC curves verified that our signature had more robust prognostic power than all immune checkpoints and immunotherapy-related biomarkers. Finally, we used 32 pairs of tissue specimens and 2 CRC cell lines to validate our signature in vitro. We first provided a robust prognostic chemokine- and chemokine receptor-based signature, which could serve as a novel biomarker for immunotherapy and chemotherapy response to guide individualized treatment for female patients with advanced colorectal adenocarcinoma.
尚未有研究报道过趋化因子及其趋化因子受体在女性晚期结直肠腺癌患者中的临床意义和综合特征。我们的研究旨在探讨趋化因子及其趋化因子受体在女性晚期结直肠腺癌患者中的表达谱,并构建基于趋化因子和趋化因子受体的特征签名。我们纳入了包含 1335 名患者的四个独立队列进行研究。使用单因素 Cox 回归和最小绝对值收缩和选择算子(LASSO)分析来构建特征签名。使用 CIBERSORT 评估免疫细胞浸润的图谱。使用 32 对女性晚期结直肠癌(CRC)患者的组织标本和 2 个 CRC 细胞系在体外验证该特征签名。进行实时定量 PCR 和 Western blot 验证特征签名基因的 mRNA 和蛋白表达水平。进行 EdU 和集落形成实验检测增殖能力。Transwell 和划痕愈合实验用于评估细胞侵袭和迁移能力。在特征签名构建和验证过程中,我们发现该特征签名更适用于女性晚期结直肠腺癌患者。因此,后续研究主要集中在该特定亚组。富集分析表明,该特征签名与免疫密切相关。免疫细胞浸润图谱显示,该特征签名与 CD8+T 细胞和中性粒细胞显著相关。基因集富集分析(GSEA)证实,高危组主要富集在促进肿瘤相关的通路和生物学过程中,而低危组主要富集在抗肿瘤免疫反应的通路和生物学过程中。该特征签名与 CTLA4、PDL1、PDL2、TMB、MSI 和 TIDE 密切相关,表明我们的特征签名可以作为免疫治疗和化疗反应的强大生物标志物。ROC 曲线验证了我们的特征签名比所有免疫检查点和免疫治疗相关生物标志物具有更强的预后预测能力。最后,我们使用 32 对组织标本和 2 个 CRC 细胞系在体外验证了我们的特征签名。我们首次提供了一个稳健的预后趋化因子和趋化因子受体为基础的特征签名,它可以作为女性晚期结直肠腺癌患者免疫治疗和化疗反应的新型生物标志物,指导个体化治疗。