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2015 年至 2022 年间,非西班牙裔白人与非裔美国人/黑人中癌症易感基因种系变异的差异率。

Disparate Rates of Germline Variants in Cancer Predisposition Genes in African American/Black Compared With Non-Hispanic White Individuals Between 2015 and 2022.

机构信息

Department of Pediatrics, UT Health San Antonio, San Antonio, TX.

Greehey Children's Cancer Research Institute, UT Health San Antonio, San Antonio, TX.

出版信息

JCO Precis Oncol. 2024 Jul;8:e2300715. doi: 10.1200/PO.23.00715.

Abstract

PURPOSE

African American/Black (AA/B) individuals are under-represented in genomic databases and thus less likely to receive definitive information from germline genetic testing (GGT) than non-Hispanic White (NHW) individuals. With nearly 500,000 AA/B and NHW individuals having undergone multigene panel testing (MGPT) for hereditary cancer risk at a single commercial laboratory, to our knowledge, we present the largest study to date investigating cancer GGT results in AA/B and NHW individuals.

METHODS

MGPT results from a retrospective cohort of AA/B (n = 48,684) and NHW (n = 444,831) patients were evaluated. Frequencies of pathogenic germline variants (PGVs) and variants of uncertain significance (VUS) were compared between AA/B and NHW individuals. Changes in frequency of VUS over time were determined. Pearson's chi-squared test was used to compare categorical variables among groups. All significance tests were two-tailed, and < .05 was considered statistically significant.

RESULTS

Between 2015 and 2022, rates of VUS decreased 2.3-fold in AA/B and 1.8-fold in NHW individuals; however, frequencies of VUS and PGV remained significantly higher (46% 32%; < .0001) and lower (9% 13%; < .0001) in AA/B compared with NHW individuals. Rates of VUS in , , , , and were significantly higher in AA/B compared with NHW individuals, whereas rates of PGV in , , and were higher in AA/B compared with NHW individuals ( < .001).

CONCLUSION

Despite reductions in VUS frequencies over time, disparities in definitive GGT results persist. Increasing inclusion of AA/B populations in both testing and research will further increase knowledge of genetic variants across these racial groups.

摘要

目的

非裔美国人/黑人(AA/B)在基因组数据库中的代表性不足,因此,与非西班牙裔白人(NHW)相比,他们从种系遗传检测(GGT)中获得明确信息的可能性较小。在一家商业实验室,已有近 50 万 AA/B 和 NHW 个体接受了多基因panel 检测(MGPT)以评估遗传性癌症风险,据我们所知,这是迄今为止最大的一项研究,旨在调查 AA/B 和 NHW 个体的癌症 GGT 结果。

方法

对来自一个回顾性队列的 AA/B(n=48684)和 NHW(n=444831)患者的 MGPT 结果进行评估。比较 AA/B 和 NHW 个体中致病性种系变异(PGV)和意义不明的变异(VUS)的频率。确定 VUS 随时间的变化频率。采用 Pearson 卡方检验比较组间的分类变量。所有显著性检验均为双侧检验, <.05 被认为具有统计学意义。

结果

在 2015 年至 2022 年期间,AA/B 个体中 VUS 的发生率下降了 2.3 倍,NHW 个体中下降了 1.8 倍;然而,AA/B 个体中 VUS 和 PGV 的频率仍然显著更高(46% 32%; <.0001)和更低(9% 13%; <.0001)。与 NHW 个体相比,AA/B 个体中 、 、 、和 的 VUS 发生率显著更高,而 AA/B 个体中 、 和 的 PGV 发生率更高( <.001)。

结论

尽管 VUS 频率随时间降低,但明确的 GGT 结果的差异仍然存在。通过在检测和研究中增加 AA/B 人群的参与,将进一步增加对这些种族群体中遗传变异的了解。

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