Department of Pediatrics, UT Health San Antonio, San Antonio, TX.
Greehey Children's Cancer Research Institute, UT Health San Antonio, San Antonio, TX.
JCO Precis Oncol. 2024 Jul;8:e2300715. doi: 10.1200/PO.23.00715.
African American/Black (AA/B) individuals are under-represented in genomic databases and thus less likely to receive definitive information from germline genetic testing (GGT) than non-Hispanic White (NHW) individuals. With nearly 500,000 AA/B and NHW individuals having undergone multigene panel testing (MGPT) for hereditary cancer risk at a single commercial laboratory, to our knowledge, we present the largest study to date investigating cancer GGT results in AA/B and NHW individuals.
MGPT results from a retrospective cohort of AA/B (n = 48,684) and NHW (n = 444,831) patients were evaluated. Frequencies of pathogenic germline variants (PGVs) and variants of uncertain significance (VUS) were compared between AA/B and NHW individuals. Changes in frequency of VUS over time were determined. Pearson's chi-squared test was used to compare categorical variables among groups. All significance tests were two-tailed, and < .05 was considered statistically significant.
Between 2015 and 2022, rates of VUS decreased 2.3-fold in AA/B and 1.8-fold in NHW individuals; however, frequencies of VUS and PGV remained significantly higher (46% 32%; < .0001) and lower (9% 13%; < .0001) in AA/B compared with NHW individuals. Rates of VUS in , , , , and were significantly higher in AA/B compared with NHW individuals, whereas rates of PGV in , , and were higher in AA/B compared with NHW individuals ( < .001).
Despite reductions in VUS frequencies over time, disparities in definitive GGT results persist. Increasing inclusion of AA/B populations in both testing and research will further increase knowledge of genetic variants across these racial groups.
非裔美国人/黑人(AA/B)在基因组数据库中的代表性不足,因此,与非西班牙裔白人(NHW)相比,他们从种系遗传检测(GGT)中获得明确信息的可能性较小。在一家商业实验室,已有近 50 万 AA/B 和 NHW 个体接受了多基因panel 检测(MGPT)以评估遗传性癌症风险,据我们所知,这是迄今为止最大的一项研究,旨在调查 AA/B 和 NHW 个体的癌症 GGT 结果。
对来自一个回顾性队列的 AA/B(n=48684)和 NHW(n=444831)患者的 MGPT 结果进行评估。比较 AA/B 和 NHW 个体中致病性种系变异(PGV)和意义不明的变异(VUS)的频率。确定 VUS 随时间的变化频率。采用 Pearson 卡方检验比较组间的分类变量。所有显著性检验均为双侧检验, <.05 被认为具有统计学意义。
在 2015 年至 2022 年期间,AA/B 个体中 VUS 的发生率下降了 2.3 倍,NHW 个体中下降了 1.8 倍;然而,AA/B 个体中 VUS 和 PGV 的频率仍然显著更高(46% 32%; <.0001)和更低(9% 13%; <.0001)。与 NHW 个体相比,AA/B 个体中 、 、 、和 的 VUS 发生率显著更高,而 AA/B 个体中 、 和 的 PGV 发生率更高( <.001)。
尽管 VUS 频率随时间降低,但明确的 GGT 结果的差异仍然存在。通过在检测和研究中增加 AA/B 人群的参与,将进一步增加对这些种族群体中遗传变异的了解。