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新型苯磺酰胺衍生物作为具有抗增殖活性的潜在选择性碳酸酐酶IX、XII抑制剂:设计、合成及计算机模拟研究

Novel benzenesulfonamide derivatives as potential selective carbonic anhydrase IX, XII inhibitors with anti-proliferative activity: Design, synthesis and in silico studies.

作者信息

Fadaly Wael A A, Mohamed Fatma E A, Nemr Mohamed T M, Sayed Ahmed M, Khalil Rehab G, Zidan Taha H

机构信息

Pharmaceutical Organic Chemistry Department, Faculty of Pharmacy, Beni-Suef University, Beni-Suef 62514, Egypt.

Pharmaceutical Organic Chemistry Department, Faculty of Pharmacy, Cairo University, Kasr El-Eini Street, 11562 Cairo, Egypt.

出版信息

Bioorg Chem. 2024 Dec;153:107881. doi: 10.1016/j.bioorg.2024.107881. Epub 2024 Oct 10.

Abstract

As inhibitors of carbonic anhydrases (CAs) IX and XII, a novel series of 1,2,3-triazole benzenesulfonamide derivatives 17a-l containing pyrazolyl-thiazole moiety was designed, synthesized, and tested for anti-proliferative activity. Compounds 17e-h demonstrated more effective inhibitory activity than acetazolamide (IC 63 nM CA IX and IC 92 nM CA XII), with IC range of 25-52 nM against CA IX and IC range of 31-80 nM against CA XII. To verify selectivity against CA IX and CA XII, carbonic anhydrase inhibitory activity of compounds 17e-h against the physiological CA I and CA II isoforms was carried out. The results showed that compounds 17e-h induced lower inhibitory activity against CA I and CA II with IC range of 0.428-0.638 μM (CA I) and 0.095-0.164 μM (CA II), in addition to higher selectivity indices (CA I/CA IX S.I. 8.9-19.92, CA I/CA XII S.I. 5.78-16.06) and (CA II/CA IX S.I. 2.83-4.35, CA II/CA XII S.I. 2.05-3.15) when compared to that of acetazolamide, IC of 0.199 μM (CA I), 0.133 μM (CA II) (CA I/CA IX S.I. 3.15, CA I/CA XII S.I. 2.16) and (CA II/CA IX S.I. 2.11, CA II/CA XII S.I. 1.44). Concerning anti-proliferative activity of compounds 17e-h, investigations were done on HEPG-2 cell line with IC ranges of 3.44-15.03 μM in comparison, 5-FU and doxorubicin showed IC values of 11.80 and 9.53 μM, respectively. Furthermore IC of MCF-7 and MDA-MB-231 were determined under both normoxic and hypoxic conditions with IC values ranging from 3.18-8.26 μM MCF-7 (normoxic), 1.39-6.05 μM MCF-7 (hypoxic), 7.13-26.3 μM MDA-MB-231 (normoxic), 0.76-16.3 μM MDA-MB-231 (hypoxic) using acetazolamide and SLC-0111 as selective CA inhibition references. Moreover, compounds 17e-h demonstrated greater safety against the normal cell line, MCF-10A, with IC of 23.06-99.50 μM in comparison to 5-FU and doxorubicin IC of 59.8 and 71.8 μM respectively. They also demonstrated (MCF-7 S.I. range of 3.77-31.28) in contrast to doxorubicin (S.I. 13.72) and (HepG-2 S.I. range of 3.60-6.95) in comparison to doxorubicin (S.I. 7.53). In relation to CA IX, XII inhibition, molecular docking of and ADME studies of sulfonamide derivatives 17a-l with CA IX (PDB: 5FL6) and CA XII (PDB: 1JD0) was carried out. Additionally, molecular dynamic simulation was carried out for compounds 17e and 17g which maintained good stability inside the active sites of both enzymes, with average RMSDs of 2.3 Å and 2.1 Å, respectively.

摘要

作为碳酸酐酶(CAs)IX和XII的抑制剂,设计、合成了一系列含吡唑基噻唑部分的新型1,2,3 - 三唑苯磺酰胺衍生物17a - l,并测试了其抗增殖活性。化合物17e - h表现出比乙酰唑胺更有效的抑制活性(CA IX的IC为63 nM,CA XII的IC为92 nM),对CA IX的IC范围为25 - 52 nM,对CA XII的IC范围为31 - 80 nM。为验证对CA IX和CA XII的选择性,对化合物17e - h针对生理性CA I和CA II同工型的碳酸酐酶抑制活性进行了研究。结果表明,化合物17e - h对CA I和CA II的抑制活性较低,CA I的IC范围为0.428 - 0.638 μM,CA II的IC范围为0.095 - 0.164 μM,此外,与乙酰唑胺相比,其选择性指数更高(CA I/CA IX S.I. 8.9 - 19.92,CA I/CA XII S.I. 5.78 - 16.06)以及(CA II/CA IX S.I. 2.83 - 4.35,CA II/CA XII S.I. 2.05 - 3.15),乙酰唑胺对CA I的IC为0.199 μM,对CA II的IC为0.133 μM(CA I/CA IX S.I. 3.15,CA I/CA XII S.I. 2.16)以及(CA II/CA IX S.I. 2.11,CA II/CA XII S.I. 1.44)。关于化合物17e - h的抗增殖活性,在HEPG - 2细胞系上进行了研究,其IC范围为3.44 - 15.03 μM,相比之下,5 - 氟尿嘧啶和阿霉素的IC值分别为11.80和9.53 μM。此外,在常氧和低氧条件下测定了MCF - 7和MDA - MB - 231的IC值,MCF - 7的IC值范围为3.18 - 8.26 μM(常氧),1.39 - 6.05 μM(低氧),MDA - MB - 231的IC值范围为7.13 - 26.3 μM(常氧),0.76 - 16.3 μM(低氧),使用乙酰唑胺和SLC - 0111作为选择性CA抑制参考。此外,化合物17e - h对正常细胞系MCF - 10A表现出更高的安全性,其IC为23.06 - 99.50 μM,而5 - 氟尿嘧啶和阿霉素的IC分别为59.8和71.8 μM。与阿霉素(S.I. 13.72)相比,它们还表现出(MCF - 7的S.I.范围为3.77 - 31.28),与阿霉素(S.I. 7.53)相比,(HepG - 2的S.I.范围为3.60 - 6.95)。关于CA IX、XII抑制,对磺酰胺衍生物17a - l与CA IX(PDB:5FL6)和CA XII(PDB:1JD0)进行了分子对接和ADME研究。此外,对化合物17e和17g进行了分子动力学模拟,它们在两种酶的活性位点内保持良好的稳定性,平均RMSD分别为2.3 Å和2.1 Å。

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