Villota Stephany D, Veloz-Villavicencio Eliana, Garcia-Iturralde Santiago, Arévalo Johanna Valentina, Lu Suying, Jaenes Katariina, Guo Yuxiu, Cicek Seray, Colwill Karen, Gingras Anne-Claude, Bremner Rod, Ponce Patricio, Pardee Keith, Cevallos Varsovia Enid
Centro de Investigación en Enfermedades Infecciosas y Vectoriales (CIREV), Instituto Nacional de Investigación en Salud Pública (INSPI), Quito, Ecuador.
Facultad de Ciencias Médicas y Bienestar. Universidad Iberoamericana del Ecuador - UNIB.E, Quito, Ecuador.
PLoS One. 2025 Apr 16;20(4):e0321794. doi: 10.1371/journal.pone.0321794. eCollection 2025.
The COVID-19 pandemic underscored the critical need to enhance screening capabilities and streamline diagnosis. Point-of-care (POC) tests offer a promising solution by decentralizing testing. We aimed to validate the PLUM device (LSK Technologies Inc.), a portable optical reader, to detect SARS-CoV-2 RNA using direct RT-LAMP targeting the ORF1a and E1 genes and patient antibodies by ELISA. The direct RT-LAMP assays employ nasopharyngeal swabs and bypass RNA extraction protocols through a brief chemical and physical lysis step. Test sensitivity and specificity were assessed against gold-standard detection methods in laboratory and field conditions. For samples with Ct values below 25, direct RT-LAMP showed 83% sensitivity and 90% specificity under laboratory conditions and 91% sensitivity and 92% specificity under field conditions. The nucleocapsid antigen antibody assay had 99% positive percent agreement (PPA) and 97% negative percent agreement (NPA), outperforming spike-RBD antigen (98% PPA, 92% NPA) and seroprevalence (98% PPA, 88% NPA) under laboratory conditions. Under field conditions, similar results were found for antibody detection for the nucleocapsid antigen (93% PPA; 100% NPA), spike-RBD (100% PPA; 94% NPA), and seroprevalence (90% PPA; 94% NPA). This study validated the PLUM device as a dual POC tool for direct RT-LAMP-based SARS-CoV-2 and ELISA-based COVID-19 antibody detection.
新冠疫情凸显了加强筛查能力和简化诊断流程的迫切需求。即时检测(POC)通过分散检测提供了一个有前景的解决方案。我们旨在验证PLUM设备(LSK技术公司),一种便携式光学读取器,使用针对ORF1a和E1基因的直接逆转录环介导等温扩增(RT-LAMP)检测严重急性呼吸综合征冠状病毒2(SARS-CoV-2)RNA,并通过酶联免疫吸附测定(ELISA)检测患者抗体。直接RT-LAMP检测采用鼻咽拭子,通过简短的化学和物理裂解步骤绕过RNA提取流程。在实验室和现场条件下,针对金标准检测方法评估了检测的敏感性和特异性。对于Ct值低于25的样本,直接RT-LAMP在实验室条件下显示出83%的敏感性和90%的特异性,在现场条件下显示出91%的敏感性和92%的特异性。核衣壳抗原抗体检测的阳性百分一致性(PPA)为99%,阴性百分一致性(NPA)为97%,在实验室条件下优于刺突受体结合域(RBD)抗原(PPA为98%,NPA为92%)和血清流行率检测(PPA为98%,NPA为88%)。在现场条件下,核衣壳抗原抗体检测(PPA为93%;NPA为100%)、刺突-RBD检测(PPA为100%;NPA为94%)和血清流行率检测(PPA为90%;NPA为94%)也得到了类似结果。本研究验证了PLUM设备作为一种双功能即时检测工具,可用于基于直接RT-LAMP的SARS-CoV-2检测和基于ELISA的新冠病毒抗体检测。