Alum Esther Ugo, Ejemot-Nwadiaro Regina Idu, Basajja Mariam, Uti Daniel Ejim, Ugwu Okechukwu Paul-Chima, Aja Patrick Maduabuchi
Department of Research and Publications, Kampala International University, P. O. Box 20000, Kampala, Uganda.
Directorate of Research, Innovation, Consultancy and Extension (RICE), Kampala International University, Kampala, Uganda.
Genes Environ. 2025 Aug 4;47(1):14. doi: 10.1186/s41021-025-00337-9.
Epitranscriptomics, the study of chemical modifications on RNA molecules, has emerged as a vital regulatory layer in gene expression. Among the numerous RNA modifications, N6-methyladenosine (m6A), 5-methylcytosine (m5C), and pseudouridine (Ψ) are particularly significant in maintaining RNA stability, splicing, translation, and cellular function. This review specifically explores how environmental toxins such as heavy metals, air pollutants, pesticides, and endocrine-disrupting chemicals can disrupt RNA modifications, leading to pathophysiological consequences. By focusing on major RNA marks and their associated regulatory enzymes (writers, erasers, and readers), we elucidate the molecular mechanisms through which toxins impair RNA processing and translation. These disruptions have been increasingly linked to disease development, including cancer, neurodegenerative disorders, metabolic syndromes, and immune dysfunction. Moreover, the review highlights recent technological advances such as high-throughput sequencing, mass spectrometry, and CRISPR-based RNA editing that enable detection and characterization of epitranscriptomic changes. Importantly, RNA modifications are dynamic and reversible, making them promising candidates for use as early biomarkers of environmental exposure and disease risk. We also discuss emerging non-canonical RNA modifications and their roles in toxicological responses. The potential of RNA-based biomarkers to enhance environmental health monitoring and precision medicine is significant, although challenges such as methodological standardization, context-specific variability, and clinical translation remain. This synthesis offers a focused, mechanistic perspective on the intersection of RNA biology and environmental toxicology, emphasizing the relevance of RNA modifications as both molecular targets and diagnostic tools in assessing the biological impact of environmental insults.
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表观转录组学是对RNA分子上化学修饰的研究,已成为基因表达中一个至关重要的调控层面。在众多RNA修饰中,N6-甲基腺苷(m6A)、5-甲基胞嘧啶(m5C)和假尿苷(Ψ)在维持RNA稳定性、剪接、翻译及细胞功能方面尤为重要。本综述具体探讨了重金属、空气污染物、农药和内分泌干扰化学物等环境毒素如何破坏RNA修饰,从而导致病理生理后果。通过聚焦主要的RNA标记及其相关调控酶(写入酶、擦除酶和读取酶),我们阐明了毒素损害RNA加工和翻译的分子机制。这些破坏与疾病发展的关联日益增加,包括癌症、神经退行性疾病、代谢综合征和免疫功能障碍。此外,该综述强调了高通量测序、质谱分析和基于CRISPR的RNA编辑等最新技术进展,这些技术能够检测和表征表观转录组变化。重要的是,RNA修饰是动态且可逆的,使其有望用作环境暴露和疾病风险的早期生物标志物。我们还讨论了新兴的非经典RNA修饰及其在毒理学反应中的作用。基于RNA的生物标志物在加强环境健康监测和精准医学方面的潜力巨大,尽管存在方法标准化、背景特异性变异性和临床转化等挑战。本综述从RNA生物学与环境毒理学交叉的角度提供了一个有重点、基于机制的观点,强调了RNA修饰作为评估环境损伤生物影响的分子靶点和诊断工具的相关性。
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