Kim Yang-Gyun, Nam Yonghyun, Westbrook Thomas M, Joo Jaehyun, Woerner Jakob, Deo Rajat, Ritchie Marylyn D, Kim Dokyoon
Division of Informatics, Department of Biostatistics, Epidemiology and Informatics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Division of Nephrology, Department of Internal Medicine, Kyung Hee University College of Medicine, Kyung Hee University Hospital at Gangdong, Seoul, Republic of Korea.
medRxiv. 2025 Jul 25:2025.07.25.25332196. doi: 10.1101/2025.07.25.25332196.
Cardiovascular disease (CVD) is the leading cause of death in patients with chronic kidney disease (CKD). However, there is still a lack of reliable biomarkers to predict cardiovascular events (CVEs) in this population.
This study aimed to develop a protein risk score (ProRS) model to predict CVEs in CKD patients. From the UK Biobank Pharma Proteomics Project (UKB-PPP), a total of 1,799 patients with CKD and no prior history of CVD were enrolled. Participants were randomly divided into a training set (70%) and an evaluation set (30%). We analyzed 2,920 plasma proteins to identify associations with CVEs, including coronary heart disease, heart failure, and ischemic stroke.
After adjusting for significant clinical factors, 38 proteins remained consistently significant in both the training and evaluation sets. Using an elastic net model, we selected 34 to construct the ProRS. The area under the receiver operating characteristics curve for annual CVEs prediction using the ProRS ranged from 0.67 to 0.74, compared to 0.60 to 0.69 for a clinical risk model, and 0.58 to 0.63 for a polygenic risk score. The 10-year incidence of CVEs among individuals in the top 5% of the ProRS distribution was 44.4%, significantly higher than 29.6% observed in the top 5% of the clinical risk model. Conversely, the bottom 5% of the ProRS group showed a 0% incidence rate, compared to 3.7% in the bottom 5% of the clinical risk model, demonstrating superior performance in both risk identification and exclusion. Notably, among patients classified as low risk by the clinical risk model, those with a high ProRS showed an increased risk of CVEs. In contrast, when the ProRS was low, the influence of the clinical risk model on event prediction was minimal. Mendelian randomization analysis identified 25 proteins whose levels were causally influenced by CKD, 10 of which were also associated with CVD.
We demonstrated that plasma proteomics holds promise as a predictive biomarker for CVEs in patients with CKD. By enabling early identification of high-risk individuals, this approach may facilitate timely preventive interventions and ultimately reduce cardiovascular mortality in this vulnerable population.
心血管疾病(CVD)是慢性肾脏病(CKD)患者的主要死因。然而,在这一人群中,仍缺乏可靠的生物标志物来预测心血管事件(CVE)。
本研究旨在开发一种蛋白质风险评分(ProRS)模型,以预测CKD患者的CVE。从英国生物银行药物蛋白质组学项目(UKB-PPP)中,共纳入了1799例无CVD病史的CKD患者。参与者被随机分为训练集(70%)和评估集(30%)。我们分析了2920种血浆蛋白,以确定与CVE(包括冠心病、心力衰竭和缺血性中风)的关联。
在调整了显著的临床因素后,38种蛋白在训练集和评估集中均持续显著。使用弹性网络模型,我们选择了34种蛋白来构建ProRS。使用ProRS预测年度CVE的受试者工作特征曲线下面积在0.67至0.74之间,而临床风险模型为0.60至0.69,多基因风险评分为0.58至0.63。ProRS分布前5%的个体中CVE的10年发病率为44.4%,显著高于临床风险模型前5%中观察到的29.6%。相反,ProRS组底部5%的发病率为0%,而临床风险模型底部5%为3.7%,这表明在风险识别和排除方面均具有卓越性能。值得注意的是,在临床风险模型分类为低风险的患者中,ProRS高的患者CVE风险增加。相反,当ProRS低时,临床风险模型对事件预测的影响最小。孟德尔随机化分析确定了25种蛋白,其水平受CKD的因果影响,其中10种也与CVD相关。
我们证明血浆蛋白质组学有望成为CKD患者CVE的预测生物标志物。通过能够早期识别高危个体,这种方法可能有助于及时进行预防性干预,并最终降低这一脆弱人群的心血管死亡率。