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玉米PR-1蛋白的计算机模拟表征、理化分析及抗真菌评估

In silico characterization, physiochemical analysis, and antifungal evaluation of the Zea mays PR-1 protein.

作者信息

Saleem Muhammad Zafar, Babar Zaher Uddin, Saif Sumaia, Saleem Ammara, Ahmad Nauman, Zulfiqar Asma, Shah Anis Ali, Iftikhar Muhammad, Shaffique Shifa, Okla Mohammad K, Alaraidh Ibrahim A

机构信息

Centre for Applied Molecular Biology, University of the Punjab, Lahore, 54590, Pakistan.

University of Education Lahore, Jauharabad Campus, Jauharabad, Pakistan.

出版信息

Sci Rep. 2025 Aug 27;15(1):31523. doi: 10.1038/s41598-025-16772-1.

Abstract

Pathogenesis-related protein 1 (PR-1) is a critical component of plant defense mechanisms, exhibiting significant antifungal activity. This study focused on the PR-1 protein from Zea mays and five other plant species (Triticum aestivum, Hordeum vulgare, Oryza sativa, Avena sativa, and Secale cereale) to explore their physicochemical, structural, and functional characteristics. The PR-1 gene from Z. mays was isolated and expressed in Escherichia coli BL21-DE3 cells, enabling structural characterization. Recombinant expression in E. coli enabled structural characterization and functional studies of the PR-1 protein, laying a foundation for future experiments. Sequence analysis revealed high similarity (65-90%) among PR-1 proteins across species, although physicochemical properties varied based on plant origin. Structural analysis showed a conserved beta-barrel structure surrounded by alpha-helices in all PR-1 proteins. In addition to in silico and structural characterization, antifungal bioassays were performed using the purified recombinant PR-1 protein against Fusarium oxysporum, a major fungal phytopathogen. These assays demonstrated notable antifungal activity, supporting the predicted defense role of PR-1 and laying experimental groundwork for its potential use in developing fungi-resistant transgenic crops.

摘要

病程相关蛋白1(PR-1)是植物防御机制的关键组成部分,具有显著的抗真菌活性。本研究聚焦于玉米以及其他五个植物物种(普通小麦、大麦、水稻、燕麦和黑麦)的PR-1蛋白,以探究它们的物理化学、结构和功能特性。从玉米中分离出PR-1基因并在大肠杆菌BL21-DE3细胞中进行表达,从而能够进行结构表征。在大肠杆菌中的重组表达使得对PR-1蛋白进行结构表征和功能研究成为可能,为未来的实验奠定了基础。序列分析显示,尽管基于植物来源的物理化学性质有所不同,但跨物种的PR-1蛋白之间具有高度相似性(65-90%)。结构分析表明,所有PR-1蛋白中都存在一个由α螺旋包围的保守β桶结构。除了进行计算机模拟和结构表征外,还使用纯化的重组PR-1蛋白对主要真菌植物病原体尖孢镰刀菌进行了抗真菌生物测定。这些测定显示出显著的抗真菌活性,支持了PR-1的预测防御作用,并为其在开发抗真菌转基因作物中的潜在应用奠定了实验基础。

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