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珍珠粟在不同生物和非生物胁迫及植物激素处理下类基因的全基因组鉴定与表达分析

Genome-wide identification and expression analysis of like genes in pearl millet under diverse biotic and abiotic stresses and phytohormone treatments.

作者信息

Nayak Jagatjeet, Jeky Chanwala, Saha Baisista, Dey Nrisingha, Mahapatra Soumya Ranjan, Misra Namrata, Giri Mrunmay Kumar

机构信息

School of Biotechnology, Kalinga Institute of Industrial Technology (KIIT) Deemed to be University, Bhubaneswar, India.

Plant Biotechnology, Institute of Life Sciences, Bhubaneswar, India.

出版信息

Plant Signal Behav. 2025 Dec 31;20(1):2552895. doi: 10.1080/15592324.2025.2552895. Epub 2025 Sep 7.

Abstract

Nonexpressor of pathogenesis-related genes 1 (NPR1) is a master regulator of salicylic acid (SA)- facilitated plant hormone signaling and plays a crucial role in plant defense through the activation of systemic acquired resistance (SAR). Although like genes are associated with stress responses in a variety of plant species, no thorough genome-wide investigation of these genes has been undertaken in pearl millet (). This study discovered seven -like genes on four pearl millet chromosomes (Chr1, Chr2, Chr4, and Chr6), which exhibit close affinity to NPRs from other plants and have common gene structures, conserved motifs, and domains. The promoter regions of like genes have numerous cis-acting elements connected with biotic and abiotic stresses, natural plant growth, and development. The qPCR results showed that -like genes were differentially expressed in distinct tissues, developmental stages, and under various biotic and abiotic stresses. Some putative genes, such as , , , and , showed considerable expression in response to abiotic stimuli such as heat, drought, and salinity. The like gene was observed to be differently expressed upon treatment of hormones such as SA and MeJA. was also significantly expressed after infection, which causes blast in pearl millet. expression study of the like genes after infection, causing downy-mildew disease, revealed that and were significantly upregulated. In addition, the docking results also showed that Pgl_GLEAN_10029279 and Pgl_GLEAN_10007810 out of all seven PgNPRs have strong interactions with the ligand SA, which proves their potential involvement in SA signaling and hence plant defense. These results offer a firm framework for comprehending the roles and development of like genes in pearl millet.

摘要

病程相关基因非表达子1(NPR1)是水杨酸(SA)介导的植物激素信号传导的主要调节因子,通过激活系统获得性抗性(SAR)在植物防御中发挥关键作用。尽管类似基因与多种植物物种的应激反应相关,但尚未对珍珠粟进行全面的全基因组研究。本研究在珍珠粟的4条染色体(Chr1、Chr2、Chr4和Chr6)上发现了7个类似基因,它们与其他植物的NPRs具有密切的亲缘关系,并且具有共同的基因结构、保守基序和结构域。类似基因的启动子区域有许多与生物和非生物胁迫、植物自然生长和发育相关的顺式作用元件。qPCR结果表明,类似基因在不同组织、发育阶段以及各种生物和非生物胁迫下差异表达。一些假定的基因,如、、、和,在热、干旱和盐度等非生物刺激下表现出显著表达。观察到类似基因在SA和MeJA等激素处理后表达不同。感病后也有显著表达,该病会导致珍珠粟瘟病。对引起霜霉病的感染后类似基因的表达研究表明,和显著上调。此外,对接结果还表明,在所有7个PgNPRs中,Pgl_GLEAN_10029279和Pgl_GLEAN_1得7810与配体SA有很强的相互作用,这证明它们可能参与SA信号传导,从而参与植物防御。这些结果为理解类似基因在珍珠粟中的作用和发育提供了坚实的框架。

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