MrBayes 3：混合模型下的贝叶斯系统发育推断。

MrBayes 3: Bayesian phylogenetic inference under mixed models.

作者信息

Ronquist Fredrik, Huelsenbeck John P

机构信息

Department of Systematic Zoology, Evolutionary Biology Centre, Uppsala University, Norbyv. 18D, SE-752 36 Uppsala, Sweden.

出版信息

Bioinformatics. 2003 Aug 12;19(12):1572-4. doi: 10.1093/bioinformatics/btg180.

DOI:10.1093/bioinformatics/btg180

PMID:12912839

Abstract

MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic evolutionary models. This allows the user to analyze heterogeneous data sets consisting of different data types-e.g. morphological, nucleotide, and protein-and to explore a wide variety of structured models mixing partition-unique and shared parameters. The program employs MPI to parallelize Metropolis coupling on Macintosh or UNIX clusters.

摘要

MrBayes 3进行贝叶斯系统发育分析，它结合了来自不同数据分区或在不同随机进化模型下进化的子集的信息。这使得用户能够分析由不同数据类型（如形态学、核苷酸和蛋白质）组成的异构数据集，并探索各种混合了分区唯一参数和共享参数的结构化模型。该程序采用MPI在Macintosh或UNIX集群上对Metropolis耦合进行并行化处理。