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历史回顾:又一个50周年——卷曲螺旋中的新周期性

Historical review: another 50th anniversary--new periodicities in coiled coils.

作者信息

Gruber Markus, Lupas Andrei N

机构信息

Max-Planck-Institute for Developmental Biology, Spemannstr. 35 D-72076, Tübingen, Germany.

出版信息

Trends Biochem Sci. 2003 Dec;28(12):679-85. doi: 10.1016/j.tibs.2003.10.008.

Abstract

In 1953, Francis Crick and Linus Pauling both proposed models of supercoiled alpha helices ('coiled coils') for the structure of keratin. These were the first attempts at modelling the tertiary structure of a protein. Crick emphasized the packing mode of the side-chains ('knobs-into-holes'), which required a periodicity of seven residues over two helical turns (7/2) and a supercoil in the opposite sense of the constituent helices. By contrast, Pauling envisaged a broader set of periodicities (4/1, 7/2, 18/5, 15/4, 11/3) and supercoils of both senses. Crick's model became canonical and the 'heptad repeat' essentially synonymous with coiled coils, but 50 years later new crystal structures and protein sequences show that the less common periodicities envisaged by Pauling also occur in coiled coils, adding a variant packing mode ('knobs-to-knobs') to the standard model. Pauling's laboratory notebooks suggest that he searched unsuccessfully for this packing mode in 1953.

摘要

1953年,弗朗西斯·克里克和莱纳斯·鲍林都提出了超螺旋α螺旋(“卷曲螺旋”)模型来解释角蛋白的结构。这些是对蛋白质三级结构进行建模的首次尝试。克里克强调了侧链的堆积模式(“旋钮对孔洞”),这需要在两个螺旋圈上有七个残基的周期性(7/2),并且超螺旋方向与组成螺旋相反。相比之下,鲍林设想了更广泛的周期性(4/1、7/2、18/5、15/4、11/3)以及两种方向的超螺旋。克里克的模型成为了经典,“七肽重复”基本上与卷曲螺旋同义,但50年后新的晶体结构和蛋白质序列表明,鲍林所设想的不太常见的周期性也存在于卷曲螺旋中,为标准模型增加了一种变体堆积模式(“旋钮对旋钮”)。鲍林的实验室笔记本表明,他在1953年曾试图寻找这种堆积模式,但未成功。

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