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蚂蚁与细菌共生关系中的宿主-共生体稳定性及快速进化速率:弓背蚁属物种与其内共生体——候选布洛赫曼氏菌的协同物种形成

Host-symbiont stability and fast evolutionary rates in an ant-bacterium association: cospeciation of camponotus species and their endosymbionts, candidatus blochmannia.

作者信息

Degnan Patrick H, Lazarus Adam B, Brock Chad D, Wernegreen Jennifer J

机构信息

Josephine Bay Paul Center for Comparative Molecular Biology and Evolution, Marine Biological Laboratory, 7 MBL Street, Woods Hole, Massachusetts 02543, USA.

出版信息

Syst Biol. 2004 Feb;53(1):95-110. doi: 10.1080/10635150490264842.

Abstract

Bacterial endosymbionts are widespread across several insect orders and are involved in interactions ranging from obligate mutualism to reproductive parasitism. Candidatus Blochmannia gen. nov. (Blochmannia) is an obligate bacterial associate of Camponotus and related ant genera (Hymenoptera: Formicidae). The occurrence of Blochmannia in all Camponotus species sampled from field populations and its maternal transmission to host offspring suggest that this bacterium is engaged in a long-term, stable association with its ant hosts. However, evidence for cospeciation in this system is equivocal because previous phylogenetic studies were based on limited gene sampling, lacked statistical analysis of congruence, and have even suggested host switching. We compared phylogenies of host genes (the nuclear EF-1alphaF2 and mitochondrial COI/II) and Blochmannia genes (16S ribosomal DNA [rDNA], groEL, gidA, and rpsB), totaling more than 7 kilobases for each of 16 Camponotus species. Each data set was analyzed using maximum likelihood and Bayesian phylogenetic reconstruction methods. We found minimal conflict among host and symbiont phylogenies, and the few areas of discordance occurred at deep nodes that were poorly supported by individual data sets. Concatenated protein-coding genes produced a very well-resolved tree that, based on the Shimodaira-Hasegawa test, did not conflict with any host or symbiont data set. Correlated rates of synonymous substitution (d(S)) along corresponding branches of host and symbiont phylogenies further supported the hypothesis of cospeciation. These findings indicate that Blochmannia-Camponotus symbiosis has been evolutionarily stable throughout tens of millions of years. Based on inferred divergence times among the ant hosts, we estimated rates of sequence evolution of Blochmannia to be approximately 0.0024 substitutions per site per million years (s/s/MY) for the 16S rDNA gene and approximately 0.1094 s/s/MY at synonymous positions of the genes sampled. These rates are several-fold higher than those for related bacteria Buchnera aphidicola and Escherichia coli. Phylogenetic congruence among Blochmannia genes indicates genome stability that typifies primary endosymbionts of insects.

摘要

细菌内共生体广泛存在于多个昆虫目中,参与从专性互利共生到生殖寄生等各种相互作用。新立克氏菌属(Blochmannia)是弓背蚁属及相关蚁属(膜翅目:蚁科)的专性细菌共生体。从野外种群采集的所有弓背蚁物种中均发现了Blochmannia,且其通过母体传递给宿主后代,这表明该细菌与其蚂蚁宿主建立了长期稳定的共生关系。然而,该系统中共物种形成的证据并不明确,因为之前的系统发育研究基于有限的基因采样,缺乏对一致性的统计分析,甚至还表明存在宿主转换现象。我们比较了宿主基因(核EF-1alphaF2和线粒体COI/II)和Blochmannia基因(16S核糖体DNA [rDNA]、groEL、gidA和rpsB)的系统发育,对16种弓背蚁物种中的每一种而言,这些基因的总长均超过7千碱基。每个数据集都使用最大似然法和贝叶斯系统发育重建方法进行了分析。我们发现宿主和共生体系统发育之间的冲突极小,少数不一致的区域出现在单个数据集支持度较差的深层节点处。串联的蛋白质编码基因产生了一棵分辨率很高的树,根据Shimodaira-Hasegawa检验,这棵树与任何宿主或共生体数据集均无冲突。宿主和共生体系统发育相应分支上同义替换率(d(S))的相关性进一步支持了共物种形成的假说。这些发现表明,Blochmannia - 弓背蚁的共生关系在数千万年的时间里一直保持着进化上的稳定性。根据推断的蚂蚁宿主之间的分化时间,我们估计Blochmannia的序列进化速率对于16S rDNA基因约为每百万年每个位点0.0024次替换(s/s/MY),在采样基因的同义位点约为0.1094 s/s/MY。这些速率比相关细菌蚜虫内共生菌和大肠杆菌的速率高出几倍。Blochmannia基因之间的系统发育一致性表明其基因组具有稳定性,这是昆虫初级内共生体的典型特征。

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