Blaby-Haas Crysten E, Merchant Sabeeha S
Department of Chemistry, Box 951569, UCLA, Los Angeles, CA 90095‐1569, USA.
Biochim Biophys Acta. 2012 Sep;1823(9):1531-52. doi: 10.1016/j.bbamcr.2012.04.010. Epub 2012 May 1.
Metal transporters are a central component in the interaction of algae with their environment. They represent the first line of defense to cellular perturbations in metal concentration, and by analyzing algal metal transporter repertoires, we gain insight into a fundamental aspect of algal biology. The ability of individual algae to thrive in environments with unique geochemistry, compared to non-algal species commonly used as reference organisms for metal homeostasis, provides an opportunity to broaden our understanding of biological metal requirements, preferences and trafficking. Chlamydomonas reinhardtii is the best developed reference organism for the study of algal biology, especially with respect to metal metabolism; however, the diversity of algal niches necessitates a comparative genomic analysis of all sequenced algal genomes. A comparison between known and putative proteins in animals, plants, fungi and algae using protein similarity networks has revealed the presence of novel metal metabolism components in Chlamydomonas including new iron and copper transporters. This analysis also supports the concept that, in terms of metal metabolism, algae from similar niches are more related to one another than to algae from the same phylogenetic clade. This article is part of a Special Issue entitled: Cell Biology of Metals.
金属转运蛋白是藻类与其环境相互作用的核心组成部分。它们是应对金属浓度细胞扰动的第一道防线,通过分析藻类金属转运蛋白库,我们能够深入了解藻类生物学的一个基本方面。与通常用作金属稳态参考生物的非藻类物种相比,单个藻类在具有独特地球化学环境中茁壮成长的能力,为拓宽我们对生物金属需求、偏好和运输的理解提供了契机。莱茵衣藻是研究藻类生物学,特别是金属代谢方面最完善的参考生物;然而,藻类生态位的多样性需要对所有已测序的藻类基因组进行比较基因组分析。利用蛋白质相似性网络对动物、植物、真菌和藻类中已知和推测的蛋白质进行比较,揭示了莱茵衣藻中存在新的金属代谢成分,包括新的铁和铜转运蛋白。该分析还支持这样一种观点,即在金属代谢方面,来自相似生态位的藻类彼此之间的关系比来自同一系统发育分支的藻类更为密切。本文是名为《金属细胞生物学》特刊的一部分。