Klein Steven, Lee Hane, Ghahremani Shahnaz, Kempert Pamela, Ischander Mariam, Teitell Michael A, Nelson Stanley F, Martinez-Agosto Julian A
Department of Human Genetics, David Geffen School of Medicine at UCLA, Los Angeles, California, USA.
J Med Genet. 2014 May;51(5):294-302. doi: 10.1136/jmedgenet-2013-101943. Epub 2014 Mar 27.
Constitutional DICER1 mutations have been associated with pleuropulmonary blastoma, cystic nephroma, Sertoli-Leydig tumours and multinodular goitres, while somatic DICER1 mutations have been reported in additional tumour types. Here we report a novel syndrome termed GLOW, an acronym for its core phenotypic findings, which include Global developmental delay, Lung cysts, Overgrowth and Wilms tumour caused by mutations in the RNase IIIb domain of DICER1.
We performed whole exome sequencing on peripheral mononuclear blood cells of an affected proband and identified a de novo missense mutation in the RNase IIIb domain of DICER1. We confirmed an additional de novo missense mutation in the same domain of an unrelated case by Sanger sequencing. These missense mutations in the RNase IIIb domain of DICER1 are suspected to affect one of four metal binding sites located within this domain. Pyrosequencing was used to determine the relative abundance of mutant alleles in various tissue types. The relative mutation abundance is highest in Wilms tumour and unaffected kidney samples when compared with blood, confirming that the mutation is mosaic. Finally, we performed bioinformatic analysis of microRNAs expressed in murine cells carrying specific Dicer1 RNase IIIb domain metal binding site-associated mutations. We have identified a subset of 3p microRNAs that are overexpressed whose target genes are over-represented in mTOR, MAPK and TGF-β signalling pathways.
We propose that mutations affecting the metal binding sites of the DICER1 RNase IIIb domain alter the balance of 3p and 5p microRNAs leading to deregulation of these growth signalling pathways, causing a novel human overgrowth syndrome.
DICER1基因的胚系突变与胸膜肺母细胞瘤、囊性肾瘤、支持间质细胞瘤和结节性甲状腺肿有关,而体细胞DICER1突变在其他肿瘤类型中也有报道。在此,我们报告一种名为GLOW的新型综合征,这是其核心表型特征的首字母缩写,包括全球发育迟缓、肺囊肿、过度生长和由DICER1核糖核酸酶IIIb结构域突变引起的肾母细胞瘤。
我们对一名受累先证者的外周血单个核细胞进行了全外显子组测序,在DICER1核糖核酸酶IIIb结构域中发现了一个新发错义突变。我们通过桑格测序在一例无关病例的同一结构域中证实了另一个新发错义突变。怀疑DICER1核糖核酸酶IIIb结构域中的这些错义突变影响该结构域内的四个金属结合位点之一。焦磷酸测序用于确定各种组织类型中突变等位基因的相对丰度。与血液相比,肾母细胞瘤和未受影响的肾脏样本中的相对突变丰度最高,证实该突变是嵌合性的。最后,我们对携带特定Dicer1核糖核酸酶IIIb结构域金属结合位点相关突变的小鼠细胞中表达的微小RNA进行了生物信息学分析。我们鉴定出一组过表达的3p微小RNA,其靶基因在mTOR、MAPK和TGF-β信号通路中过度富集。
我们提出,影响DICER1核糖核酸酶IIIb结构域金属结合位点基因的突变会改变微小RNA中微小RNA-3p和微小RNA-5p的平衡,导致这些生长信号通路失调,从而引发一种新型人类过度生长综合征。