Karaca Caglar, Atac Ahmet, Karabacak Mehmet
Department of Physics, Celal Bayar University, Manisa, Turkey.
Department of Mechatronics Engineering, H.F.T. Technology Faculty, Celal Bayar University, Turgutlu, Manisa, Turkey.
Spectrochim Acta A Mol Biomol Spectrosc. 2015 Feb 5;136 Pt B:295-305. doi: 10.1016/j.saa.2014.08.137. Epub 2014 Oct 29.
In this study, 5-iodosalicylic acid (5-ISA, C7H5IO3) is structurally characterized by FT-IR, FT-Raman, NMR and UV spectroscopies. There are eight conformers, Cn, n=1-8 for this molecule therefore the molecular geometry for these eight conformers in the ground state are calculated by using the ab-initio density functional theory (DFT) B3LYP method approach with the aug-cc-pVDZ-PP basis set for iodine and the aug-cc-pVDZ basis set for the other elements. The computational results identified that the most stable conformer of 5-ISA is the C1 form. The vibrational spectra are calculated DFT method invoking the same basis sets and fundamental vibrations are assigned on the basis of the total energy distribution (TED) of the vibrational modes, calculated with scaled quantum mechanics (SQM) method with PQS program. Total density of state (TDOS) and partial density of state (PDOS) and also overlap population density of state (COOP or OPDOS) diagrams analysis for C1 conformer were calculated using the same method. The energy and oscillator strength are calculated by time-dependent density functional theory (TD-DFT) results complement with the experimental findings. Besides, charge transfer occurring in the molecule between HOMO and LUMO energies, frontier energy gap, molecular electrostatic potential (MEP) are calculated and presented. The NMR chemical shifts ((1)H and (13)C) spectra are recorded and calculated using the gauge independent atomic orbital (GIAO) method. Mulliken atomic charges of the title molecule are also calculated, interpreted and compared with salicylic acid. The optimized bond lengths, bond angles and calculated NMR and UV, vibrational wavenumbers showed the best agreement with the experimental results.
在本研究中,通过傅里叶变换红外光谱(FT-IR)、傅里叶变换拉曼光谱(FT-Raman)、核磁共振(NMR)和紫外光谱对5-碘水杨酸(5-ISA,C7H5IO3)进行了结构表征。该分子有八个构象体,即Cn,n = 1 - 8,因此使用从头算密度泛函理论(DFT)B3LYP方法,对碘采用aug-cc-pVDZ-PP基组,对其他元素采用aug-cc-pVDZ基组,计算了这八个构象体基态的分子几何结构。计算结果表明,5-ISA最稳定的构象体是C1形式。采用相同的基组,通过DFT方法计算振动光谱,并根据使用PQS程序的缩放量子力学(SQM)方法计算的振动模式的总能量分布(TED)指定基本振动。使用相同方法计算了C1构象体的总态密度(TDOS)、分态密度(PDOS)以及重叠布居态密度(COOP或OPDOS)图分析。通过含时密度泛函理论(TD-DFT)计算能量和振子强度,其结果与实验结果相互补充。此外,还计算并给出了分子在最高占据分子轨道(HOMO)和最低未占据分子轨道(LUMO)能量之间发生的电荷转移、前沿能隙、分子静电势(MEP)。使用规范无关原子轨道(GIAO)方法记录并计算了核磁共振化学位移((1)H和(13)C)光谱。还计算、解释了标题分子的 Mulliken 原子电荷,并与水杨酸进行了比较。优化后的键长、键角以及计算得到的核磁共振和紫外、振动波数与实验结果显示出最佳一致性。