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中国北京临床分离的马链球菌兽疫亚种的分子特征及抗生素耐药性

Molecular characterization and antibiotic resistance of clinical Streptococcus dysgalactiae subsp. equisimilis in Beijing, China.

作者信息

Lu Binghuai, Fang Yujie, Huang Lei, Diao Baowei, Du Xiaoli, Kan Biao, Cui Yanchao, Zhu Fengxia, Li Dong, Wang Duochun

机构信息

Department of Laboratory Medicine, Civil Aviation General Hospital, Beijing 100123, China.

State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China; Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Hangzhou 310003, China.

出版信息

Infect Genet Evol. 2016 Jun;40:119-125. doi: 10.1016/j.meegid.2016.01.030. Epub 2016 Feb 27.

Abstract

Streptococcus dysgalactiae subsp. equisimilis (SDSE) is presently considered as a human pathogen associated with clinical infection. We characterized 56 SDSE isolates collected from two tertiary hospitals in Beijing, China. Sixteen distinct emm types/subtypes were detected, dominated by stG245.0 (32.1%), stG652.0 (10.7%), stG6.1 (10.7%) and stG485.0 (10.7%), and a novel stG840.0 variant type was identified. All isolates possessed virulence genes of sagA and scpA, and most carried slo (98.2%), ska (98.2%) and speG(dys) (35.7%). By multilocus sequence typing (MLST) analysis, 17 individual sequence types (STs) were distinguished, including 7 newly-identified STs (26.8% of isolates), of which ST127 (30.4%), ST7 (12.5%) and ST44 (10.7%) dominated. Meanwhile, pulsed-field gel electrophoresis (PFGE) analysis revealed 33 pattern types (PTs), which were further combined into 16 pattern clusters (PCs), and 59.3% of isolates were distributed into 2 dominant PCs. Notably, emm types had both close relationship and consistency with STs and PFGE PCs. Furthermore, of 56 SDSE isolates, the predominant antibiotic resistances were erythromycin (71.4%), clindamycin (71.4%) and tetracycline (60.7%). Correspondingly, the prevalent resistance genes of macrolide and tetracycline were erm(B) (78.6%) and tet(M) (73.2%). In addition, multiple point mutations of parC, one of fluoroquinolone resistance genes, were observed (accounting for 75%), and were divided into 12 types, with parC 07 as the predominant type. Our data suggested the wide molecular diversity and distinctive regional features of SDSE from clinical infection in Beijing, China.

摘要

马链球菌兽疫亚种(SDSE)目前被认为是一种与临床感染相关的人类病原体。我们对从中国北京两家三级医院收集的56株SDSE分离株进行了特征分析。检测到16种不同的emm型/亚型,以stG245.0(32.1%)、stG652.0(10.7%)、stG6.1(10.7%)和stG485.0(10.7%)为主,并且鉴定出一种新的stG840.0变异型。所有分离株都具有sagA和scpA毒力基因,大多数携带slo(98.2%)、ska(98.2%)和speG(dys)(35.7%)。通过多位点序列分型(MLST)分析,区分出17种单倍型序列类型(STs),包括7种新鉴定的STs(占分离株的26.8%),其中ST127(30.4%)、ST7(12.5%)和ST44(10.7%)占主导。同时,脉冲场凝胶电泳(PFGE)分析显示33种脉冲型(PTs),这些进一步合并为16个脉冲簇(PCs),59.3%的分离株分布在2个主要PCs中。值得注意的是,emm型与STs和PFGE PCs既有密切关系又有一致性。此外,在56株SDSE分离株中,主要的抗生素耐药性为红霉素(71.4%)、克林霉素(71.4%)和四环素(60.7%)。相应地,大环内酯类和四环素的流行耐药基因为erm(B)(78.6%)和tet(M)(73.2%)。此外,观察到氟喹诺酮耐药基因之一parC的多位点突变(占75%),并分为12种类型,以parC 07为主导类型。我们的数据表明中国北京临床感染的SDSE具有广泛的分子多样性和独特的区域特征。

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