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枯草芽孢杆菌中整合性接合元件ICEBs1的生物学特性

Biology of ICEBs1, an integrative and conjugative element in Bacillus subtilis.

作者信息

Auchtung Jennifer M, Aleksanyan Naira, Bulku Artemisa, Berkmen Melanie B

机构信息

Alkek Center for Metagenomics and Microbiome Research, Department of Molecular Virology and Microbiology, Baylor College of Medicine, 1 Baylor Plaza, Houston, TX 77030, USA.

Department of Chemistry and Biochemistry, Suffolk University, 8 Ashburton Place, Boston, MA 02108, USA.

出版信息

Plasmid. 2016 Jul;86:14-25. doi: 10.1016/j.plasmid.2016.07.001. Epub 2016 Jul 2.

Abstract

Horizontal gene transfer plays a profound role in bacterial evolution by propelling the rapid transfer of genes and gene cassettes. Integrative and conjugative elements (ICEs) are one important mechanism driving horizontal gene transfer. ICEs, also known as conjugative transposons, reside on the host chromosome but can excise to form a conjugative DNA circle that is capable of transfer to other cells. Analysis of the large number of completed bacterial genome sequences has revealed many previously unrecognized ICEs, including ICEBs1, found in the Gram-positive model bacterium Bacillus subtilis. The discovery of ICEBs1 in an organism with such an impressive array of molecular tools for genetics and molecular biology was fortuitous. Significant insights into ICE biology have resulted since its discovery <15years ago. In this review, we describe aspects of ICEBs1 biology, such as excision, conjugative transfer, and reintegration, likely to be conserved across many ICEs. We will also highlight some of the more unexpected aspects of ICEBs1 biology, such as its ability to undergo plasmid-like replication after excision and its ability to mobilize plasmids lacking dedicated mobilization functions. A molecular understanding of ICEBs1 has led to additional insights into signals and mechanisms that promote horizontal gene transfer and shape bacterial evolution.

摘要

水平基因转移通过推动基因和基因盒的快速转移,在细菌进化中发挥着深远的作用。整合性接合元件(ICEs)是驱动水平基因转移的一种重要机制。ICEs,也被称为接合转座子,位于宿主染色体上,但可以切除形成一个能够转移到其他细胞的接合性DNA环。对大量已完成测序的细菌基因组的分析揭示了许多以前未被识别的ICEs,包括在革兰氏阳性模式细菌枯草芽孢杆菌中发现的ICEBs1。在具有如此众多令人印象深刻的遗传学和分子生物学分子工具的生物体中发现ICEBs1是偶然的。自15年前发现ICEBs1以来,对ICE生物学有了重要的认识。在这篇综述中,我们描述了ICEBs1生物学的一些方面,如切除、接合转移和重新整合,这些方面可能在许多ICEs中是保守的。我们还将强调ICEBs1生物学中一些更意想不到的方面,例如其切除后能够进行类似质粒的复制以及能够动员缺乏专门动员功能的质粒。对ICEBs1的分子理解导致了对促进水平基因转移和塑造细菌进化的信号和机制的更多认识。

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