Albert James S, Schoolmaster Donald R, Tagliacollo Victor, Duke-Sylvester Scott M
Department of Biology, University of Louisiana at Lafayette, 104 E. University Circle, Lafayette, LA 70503, USA.
WARC US Geological Survey, 700 Cajundome Blvd Lafayette, LA 70506 USA.
Syst Biol. 2017 Mar 1;66(2):167-182. doi: 10.1093/sysbio/syw080.
Macroevolutionary theory posits three processes leading to lineage diversification and the formation of regional biotas: dispersal (species geographic range expansion), speciation (species lineage splitting), and extinction (species lineage termination). The Theory of Island Biogeography (TIB) predicts species richness values using just two of these processes; dispersal and extinction. Yet most species on Earth live on continents or continental shelves, and the dynamics of evolutionary diversification at regional and continental scales are qualitatively different from those that govern the formation of species richness on biogeographic islands. Certain geomorphological processes operating perennially on continental platforms displace barriers to gene flow and organismal dispersal, and affect all three terms of macroevolutionary diversification. For example, uplift of a dissected landscape and river capture both merge and separate portions of adjacent areas, allowing dispersal and larger geographic ranges, vicariant speciation and smaller geographic ranges, and extinction when range sizes are subdivided below a minimum persistence threshold. The TIB also does not predict many biogeographic and phylogenetic patterns widely observed in continentally distributed taxa, including: (i) power function-like species-area relationships; (ii) log-normal distribution of species geographic range sizes, in which most species have restricted ranges (are endemic) and few species have broad ranges (are cosmopolitan); (iii) mid-domain effects with more species toward the geographic center, and more early-branching, species-poor clades toward the geographic periphery; (iv) exponential rates of net diversification with log-linear accumulation of lineages through geological time; and (v) power function-like relationships between species-richness and clade diversity, in which most clades are species-poor and few clades are species-rich. Current theory does not provide a robust mechanistic framework to connect these seemingly disparate patterns. Here we present SEAMLESS (Spatially Explicit Area Model of Landscape Evolution by SimulationS) that generates clade diversification by moving geographic barriers on a continuous, neutral landscape. SEAMLESS is a neutral Landscape Evolution Model (LEM) that treats species and barriers as functionally equivalent with respect to model parameters. SEAMLESS differs from other model-based biogeographic methods (e.g., Lagrange, GeoSSE, BayArea, and BioGeoBEARS) by modeling properties of dispersal barriers rather than areas, and by modeling the evolution of species lineages on a continuous landscape, rather than the evolution of geographic ranges along branches of a phylogeny. SEAMLESS shows how dispersal is required to maintain species richness and avoid clade-wide extinction, demonstrates that ancestral range size does not predict species richness, and provides a unified explanation for the suite of commonly observed biogeographic and phylogenetic patterns listed above. SEAMLESS explains how a simple barrier-displacement mechanism affects lineage diversification under neutral conditions, and is advanced here toward the formulation of a general theory of continental biogeography. [Diversification, extinction, geodispersal, macroevolution, river capture, vicariance.].
扩散(物种地理范围扩张)、物种形成(物种谱系分裂)和灭绝(物种谱系终止)。岛屿生物地理学理论(TIB)仅使用其中两个过程来预测物种丰富度值;扩散和灭绝。然而,地球上大多数物种生活在大陆或大陆架上,区域和大陆尺度上进化多样化的动态与控制生物地理岛屿上物种丰富度形成的动态在质上有所不同。在大陆平台上常年运作的某些地貌过程消除了基因流动和生物扩散的障碍,并影响宏观进化多样化的所有三个方面。例如,切割景观的隆起和河流袭夺既合并又分隔相邻区域的部分,允许扩散和更大的地理范围、替代物种形成和更小的地理范围,以及当范围大小细分到低于最小持续阈值时的灭绝。TIB也无法预测在大陆分布的分类群中广泛观察到的许多生物地理和系统发育模式,包括:(i)幂函数样的物种 - 面积关系;(ii)物种地理范围大小的对数正态分布,其中大多数物种范围受限(为特有种),少数物种范围广泛(为广布种);(iii)中间区域效应,地理中心物种更多,地理边缘早期分支、物种贫乏的类群更多;(iv)净多样化的指数速率以及谱系在地质时间内的对数线性积累;(v)物种丰富度与类群多样性之间的幂函数样关系,其中大多数类群物种贫乏,少数类群物种丰富。当前理论没有提供一个强大的机制框架来连接这些看似不同的模式。在这里,我们提出了SEAMLESS(通过模拟进行景观演化的空间明确区域模型),它通过在连续的中性景观上移动地理屏障来生成类群多样化。SEAMLESS是一个中性景观演化模型(LEM),在模型参数方面将物种和屏障视为功能等效。SEAMLESS与其他基于模型的生物地理方法(例如Lagrange、GeoSSE、BayArea和BioGeoBEARS)的不同之处在于,它模拟扩散屏障的属性而非区域,并在连续景观上模拟物种谱系的演化,而不是沿着系统发育分支的地理范围的演化。SEAMLESS展示了如何需要扩散来维持物种丰富度并避免类群范围内的灭绝,证明了祖先范围大小并不能预测物种丰富度,并为上述一系列常见的生物地理和系统发育模式提供了统一的解释。SEAMLESS解释了一个简单的屏障位移机制在中性条件下如何影响谱系多样化,并在此朝着大陆生物地理学一般理论的形成迈进。[多样化、灭绝、地理扩散、宏观进化、河流袭夺、替代分布。]