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基于噬菌体T7 RNA聚合酶的工程化光激活基因开关

Engineered Photoactivatable Genetic Switches Based on the Bacterium Phage T7 RNA Polymerase.

作者信息

Han Tiyun, Chen Quan, Liu Haiyan

机构信息

Hefei Institutes of Physical Science, Chinese Academy of Sciences , Hefei, Anhui 230031, China.

出版信息

ACS Synth Biol. 2017 Feb 17;6(2):357-366. doi: 10.1021/acssynbio.6b00248. Epub 2016 Nov 15.

Abstract

Genetic switches in which the activity of T7 RNA polymerase (RNAP) is directly regulated by external signals are obtained with an engineering strategy of splitting the protein into fragments and using regulatory domains to modulate their reconstitutions. Robust switchable systems with excellent dark-off/light-on properties are obtained with the light-activatable VVD domain and its variants as regulatory domains. For the best split position found, working switches exploit either the light-induced interactions between the VVD domains or allosteric effects. The split fragments show high modularity when they are combined with different regulatory domains such as those with chemically inducible interaction, enabling chemically controlled switches. To summarize, the T7 RNA polymerase-based switches are powerful tools to implement light-activated gene expression in different contexts. Moreover, results about the studied split positions and domain organizations may facilitate future engineering studies on this and on related proteins.

摘要

通过将蛋白质拆分成片段并使用调节结构域来调节其重组的工程策略,获得了T7 RNA聚合酶(RNAP)活性直接受外部信号调节的遗传开关。以光可激活的VVD结构域及其变体作为调节结构域,获得了具有出色暗关/光开特性的强大可切换系统。对于找到的最佳拆分位置,有效的开关利用了VVD结构域之间的光诱导相互作用或变构效应。当拆分片段与不同的调节结构域(如具有化学诱导相互作用的结构域)结合时,它们显示出高模块化,从而实现化学控制的开关。总之,基于T7 RNA聚合酶的开关是在不同背景下实现光激活基因表达的有力工具。此外,关于所研究的拆分位置和结构域组织的结果可能会促进未来对该蛋白及相关蛋白的工程研究。

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