University Lille, INRA, ISA, University Artois, University Littoral Côte d'Opale, EA 7394-ICV- Institut Charles Viollette, F-59000, Lille, France.
Laboratoire de Stress, Défenses et Reproduction des Plantes URVVC-EA 4707, UFR Sciences Exactes et Naturelles, University of Reims-Champagne-Ardenne, Reims, France.
Environ Sci Pollut Res Int. 2018 Oct;25(30):29794-29807. doi: 10.1007/s11356-017-9166-3. Epub 2017 May 25.
Bacteria belonging to the genus Burkholderia live in various ecological niches and present a significant role in the environments through the excretion of a wide variety of secondary metabolites including modular nonribosomal peptides (NRPs) and polyketides (PKs). These metabolites represent a widely distributed biomedically and biocontrol important class of natural products including antibiotics, siderophores, and anticancers as well as biopesticides that are considered as a novel source that can be used to defend ecological niche from competitors and to promote plant growth. The aim of this review is to present all NRPs produced or potentially produced by strains of Burkholderia, as NRPs represent a major source of active compounds implicated in biocontrol. The review is a compilation of results from a large screening we have performed on 48 complete sequenced genomes available in NCBI to identify NRPS gene clusters, and data found in the literature mainly because some interesting compounds are produced by strains not yet sequenced. In addition to NRPs, hybrids NRPs/PKs are also included. Specific features about biosynthetic gene clusters and structures of the modular enzymes responsible for the synthesis, the biological activities, and the potential uses in agriculture and pharmaceutical of NRPs and hybrids NRPs/PKs will also be discussed.
伯克霍尔德氏菌属的细菌生活在各种生态环境中,通过分泌各种次级代谢产物,包括模块化非核糖体肽(NRPs)和聚酮(PKs),在环境中发挥着重要作用。这些代谢产物代表了一类广泛分布的具有重要生物医学和生物防治意义的天然产物,包括抗生素、铁载体和抗癌药物以及生物农药,它们被认为是一种新型的来源,可以用来抵御生态位的竞争者并促进植物生长。本综述的目的是介绍由伯克霍尔德氏菌产生或可能产生的所有 NRPs,因为 NRPs 是参与生物防治的活性化合物的主要来源。这篇综述是对我们在 NCBI 上可用的 48 个完整测序基因组进行大规模筛选的结果的汇编,以鉴定 NRPS 基因簇,以及文献中发现的数据,主要是因为一些有趣的化合物是由尚未测序的菌株产生的。除了 NRPs 之外,还包括 NRPs/PKs 杂种。还将讨论负责合成的模块化酶的生物合成基因簇和结构的特异性、生物活性以及在农业和制药领域的潜在用途。